RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 KRT87PA6NCN2 255 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 CDC7O00311 574 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 AZIN1O14977 448 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 HCRTR1O43613 425 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 MLYCDO95822 493 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 SLC34A1Q06495 639 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 KCNAB2Q13303 367 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 ZIC1Q15915 447 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 CMPK2Q5EBM0 449 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 C1orf146Q5VVC0 180 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 LCN10Q6JVE6 187 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 LARP4Q71RC2 724 aaKnown RBP eCLIP16.86■□□□□ 0.293e-7■■■□□ 14.8
MRPL28-208ENST00000469744 GPSM1Q86YR5 675 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 DEFB107AQ8IZN7 70 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 FBXW8Q8N3Y1 598 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 C19orf47Q8N9M1 422 aaKnown RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 OR8K5Q8NH50 307 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 GIMAP7Q8NHV1 300 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 EXT2Q93063 718 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 SLC30A3Q99726 388 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 TWSG1Q9GZX9 223 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 TNFRSF12AQ9NP84 129 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 PFDN4Q9NQP4 134 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 OR6C2Q9NZP2 312 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 GALPQ9UBC7 116 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 KCND3Q9UK17 655 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 PCDHB3Q9Y5E6 796 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 FER1L5A0AVI2 2057 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 ISM1B1AKI9 464 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 UBDO15205 165 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 MAP3K7O43318 606 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 SLC28A2O43868 658 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 CREG1O75629 220 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 SLCO2B1O94956 709 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 ATXN8OSP0DMR3 200 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 CYP2A7P20853 494 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 EEF1DP29692 281 aaKnown RBP16.85■□□□□ 0.29
MRPL28-208ENST00000469744 PKLRP30613 574 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 RGS4P49798 205 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 MTTPP55157 894 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 CLCQ05315 142 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 STX5Q13190 355 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 RCN1Q15293 331 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 ADAMTSL2Q86TH1 951 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 SPNS2Q8IVW8 549 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 PGAM4Q8N0Y7 254 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 LINC01555Q8NAE3 123 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 EEF1AKMT1Q8WVE0 214 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 SKA2Q8WVK7 121 aaPredicted RBP16.85■□□□□ 0.29
MRPL28-208ENST00000469744 CLIP3Q96DZ5 547 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 C19orf60Q96EN9 201 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 PPP1R36Q96LQ0 422 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 CCT7Q99832 543 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 FAM117AQ9C073 453 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 CHST8Q9H2A9 424 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 IKZF3Q9UKT9 509 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 KLHL20Q9Y2M5 609 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 LRRC42Q9Y546 428 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 PCDHGA6Q9Y5G7 932 aa16.85■□□□□ 0.29
MRPL28-208ENST00000469744 A0A0J9YY10 115 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 NPEPPSL1A6NEC2 478 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 C21orf140B9A014 251 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 SKAP2O75563 359 aaPredicted RBP16.84■□□□□ 0.29
MRPL28-208ENST00000469744 KRT36O76013 467 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 CTSBP07858 339 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 BDKRB1P46663 353 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 MRPL19P49406 292 aaKnown RBP16.84■□□□□ 0.29
MRPL28-208ENST00000469744 TBL3Q12788 808 aaKnown RBP16.84■□□□□ 0.29
MRPL28-208ENST00000469744 GRB7Q14451 532 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 PLEKHS1Q5SXH7 462 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 FAM69BQ5VUD6 431 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 TMEM198Q66K66 360 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 DCUN1D3Q8IWE4 304 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 CPNE9Q8IYJ1 553 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 APOBEC4Q8WW27 367 aaKnown RBP16.84■□□□□ 0.29
MRPL28-208ENST00000469744 CLPTM1LQ96KA5 538 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 MENTQ9BUN1 341 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 SLC25A18Q9H1K4 315 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 ADNPQ9H2P0 1102 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
MRPL28-208ENST00000469744 TNPO3Q9Y5L0 923 aaKnown RBP16.84■□□□□ 0.29
MRPL28-208ENST00000469744 HEMK1Q9Y5R4 338 aaPredicted RBP16.84■□□□□ 0.29
MRPL28-208ENST00000469744 BSNQ9UPA5 3926 aa16.83■□□□□ 0.29
MRPL28-208ENST00000469744 MEN1O00255 615 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 EIF3FO00303 357 aaPredicted RBP16.83■□□□□ 0.28
MRPL28-208ENST00000469744 SIX3O95343 332 aaPredicted RBP16.83■□□□□ 0.28
MRPL28-208ENST00000469744 ZIC2O95409 532 aaPredicted RBP16.83■□□□□ 0.28
MRPL28-208ENST00000469744 SFTPCP11686 197 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 RAB28P51157 221 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 CDH13P55290 713 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 PKNOX1P55347 436 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 ITGA1P56199 1179 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 AP2B1P63010 937 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 IL10RAQ13651 578 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 PTCHD3Q3KNS1 767 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 CCSMST1Q4G0I0 132 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 CRTC2Q53ET0 693 aaPredicted RBP16.83■□□□□ 0.28
MRPL28-208ENST00000469744 METTL2BQ6P1Q9 378 aaKnown RBP16.83■□□□□ 0.28
MRPL28-208ENST00000469744 UNC5DQ6UXZ4 953 aa16.83■□□□□ 0.28
MRPL28-208ENST00000469744 CYHR1Q6ZMK1 362 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms