RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 TRAT1Q6PIZ9 186 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 DHRS11Q6UWP2 260 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 BTNL8Q6UX41 500 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 PRUNE1Q86TP1 453 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 SLC25A42Q86VD7 318 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 SLC47A2Q86VL8 602 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 METTL23Q86XA0 190 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 ZFAND4Q86XD8 727 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 RNF130Q86XS8 419 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 Q8N377 158 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 CCDC185Q8N715 623 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 OR10G7Q8NGN6 311 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 SPPL2AQ8TCT8 520 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 RAD54LQ92698 747 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 OVOL2Q9BRP0 275 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 CHCHD5Q9BSY4 110 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 ALKBH7Q9BT30 221 aaPredicted RBP2.62□□□□□ -1.99
TPR-204ENST00000469463 PUS3Q9BZE2 481 aaKnown RBP2.62□□□□□ -1.99
TPR-204ENST00000469463 MTIF3Q9H2K0 278 aaKnown RBP2.62□□□□□ -1.99
TPR-204ENST00000469463 PNNQ9H307 717 aaKnown RBP2.62□□□□□ -1.99
TPR-204ENST00000469463 RPS10P5Q9NQ39 176 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 KLK11Q9UBX7 282 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 FBXL4Q9UKA2 621 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 AGTPBP1Q9UPW5 1226 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 SATB2Q9UPW6 733 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 ARID2Q68CP9 1835 aa2.62□□□□□ -1.99
TPR-204ENST00000469463 HTR3EA5X5Y0 456 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 GLTPD2A6NH11 291 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 ACOD1A6NK06 481 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 NPIPB9F8W1W9 429 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 PDHXO00330 501 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 SIGLEC5O15389 551 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 LRCH4O75427 683 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 MOCS2O96007 188 aaPredicted RBP2.61□□□□□ -1.99
TPR-204ENST00000469463 CALCAP01258 141 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 MT-ND2P03891 347 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 RLN1P04808 185 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 FAM58BPP0C7Q3 252 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 EZRP15311 586 aaKnown RBP2.61□□□□□ -1.99
TPR-204ENST00000469463 CD1DP15813 335 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 PSMB4P28070 264 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 PKLRP30613 574 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 DUTP33316 252 aaKnown RBP2.61□□□□□ -1.99
TPR-204ENST00000469463 GP5P40197 560 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 SLC1A3P43003 542 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 PEX3P56589 373 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 FOLH1Q04609 750 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 SCN1BQ07699 218 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 CD300CQ08708 224 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 SRSF9Q13242 221 aaKnown RBP eCLIP2.61□□□□□ -1.99
TPR-204ENST00000469463 MAPK11Q15759 364 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 ZRANB3Q5FWF4 1079 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 TXNRD3NBQ6F5E7 133 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 ZNF774Q6NX45 483 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 ZNF841Q6ZN19 808 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 TRMT11Q7Z4G4 463 aaKnown RBP2.61□□□□□ -1.99
TPR-204ENST00000469463 TIGD4Q8IY51 512 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 KIAA0895Q8NCT3 520 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 NCOA7Q8NI08 942 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 CASP10Q92851 521 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 RIT1Q92963 219 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 SPATA17Q96L03 361 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 PCDHB18PQ96TA0 734 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 TRIM6Q9C030 488 aaPredicted RBP2.61□□□□□ -1.99
TPR-204ENST00000469463 MINDY3Q9H8M7 445 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 HEXA-AS1Q9H8Q6 139 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 GTSE1Q9NYZ3 720 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 NOCTQ9UK39 431 aaKnown RBP2.61□□□□□ -1.99
TPR-204ENST00000469463 SH3GLB1Q9Y371 365 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 PCNX3Q9H6A9 2034 aa2.61□□□□□ -1.99
TPR-204ENST00000469463 IGHV4-30-2A0A087WSY4 118 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 CCDC162PA2VCL2 907 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 SHISA9B4DS77 424 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 ECE2O60344 883 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 MTRF1O75570 445 aaKnown RBP2.6□□□□□ -1.99
TPR-204ENST00000469463 QDPRP09417 244 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 PIK3R1P27986 724 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 SOAT1P35610 550 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 OR3A3P47888 321 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 NPBWR1P48145 328 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 PTENP60484 403 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 FKBP3Q00688 224 aaKnown RBP2.6□□□□□ -1.99
TPR-204ENST00000469463 ABRQ12979 859 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 PTK6Q13882 451 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 PPA1Q15181 289 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 SPANXN4Q5MJ08 99 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 C17orf107Q6ZR85 190 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 SPATA19Q7Z5L4 167 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 C5orf24Q7Z6I8 188 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 KCNMB4Q86W47 210 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 SLC22A15Q8IZD6 547 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 ABHD12Q8N2K0 398 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 POM121L12Q8N7R1 296 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 PRSS33Q8NF86 280 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 OR5M9Q8NGP3 310 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 TOMM40LQ969M1 308 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 PDLIM5Q96HC4 596 aaKnown RBP2.6□□□□□ -1.99
TPR-204ENST00000469463 SERINC2Q96SA4 455 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 ATF6BQ99941 703 aa2.6□□□□□ -1.99
TPR-204ENST00000469463 ZNF577Q9BSK1 485 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms