RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ANP32DO95626 131 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 STATHP02808 62 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 LAMP1P11279 417 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 MAGP20916 626 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 TPP2P29144 1249 aaPredicted RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 MAPK12P53778 367 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 EEFSECP57772 596 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 RPS15AP62244 130 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 CSTF1Q05048 431 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 LIPEQ05469 1076 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 SLC5A12Q1EHB4 618 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 FIGLAQ6QHK4 219 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 SPESP1Q6UW49 350 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 OR8J3Q8NGG0 315 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.12■□□□□ 0.492e-6■■■■■ 54.3
SMC4-209ENST00000468653 PYDC1Q8WXC3 89 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 ANKRD27Q96NW4 1050 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 INPP5KQ9BT40 448 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 ZMYND15Q9H091 742 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 ALG2Q9H553 416 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 S100A14Q9HCY8 104 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 SERHLQ9NQF3 203 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 GMPR2Q9P2T1 348 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 ATP6V1HQ9UI12 483 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 A0A1B0GVT2 93 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 OR2A25A4D2G3 310 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 LMO7DNF2Z398 122 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 KLHL18O94889 574 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 FKBP9O95302 570 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 B3GALT4O96024 378 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 PIM1P11309 404 aaPredicted RBP18.11■□□□□ 0.49
SMC4-209ENST00000468653 TYRP1P17643 537 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 PLA2G16P53816 162 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 MTPNP58546 118 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 BNIP2Q12982 314 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 DUOXA1Q1HG43 343 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 DEFB133Q30KQ1 61 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 OR4C11Q6IEV9 310 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 FAM71E1Q6IPT2 247 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 IKBIPQ70UQ0 350 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 CAMKMTQ7Z624 323 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 IFNEQ86WN2 208 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 NUDT13Q86X67 352 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 ARL14Q8N4G2 192 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 VPS37AQ8NEZ2 397 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 COQ8BQ96D53 544 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 SH3GL1Q99961 368 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 KCTD14Q9BQ13 255 aaPredicted RBP18.11■□□□□ 0.49
SMC4-209ENST00000468653 MACROD1Q9BQ69 325 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 ZNF717Q9BY31 904 aaPredicted RBP18.11■□□□□ 0.49
SMC4-209ENST00000468653 PAIP1Q9H074 479 aaKnown RBP18.11■□□□□ 0.49
SMC4-209ENST00000468653 BTBD3Q9Y2F9 522 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 THADAQ6YHU6 1953 aa18.11■□□□□ 0.49
SMC4-209ENST00000468653 SNRNP200O75643 2136 aaKnown RBP18.1■□□□□ 0.49
SMC4-209ENST00000468653 PIAS2O75928 621 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 IL3P08700 152 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 TDGF1P13385 188 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 GNSP15586 552 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 TRPC1P48995 793 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 GSK3BP49841 420 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 WNT3P56703 355 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 MC1RQ01726 317 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 SRSF5Q13243 272 aaKnown RBP18.1■□□□□ 0.49
SMC4-209ENST00000468653 TOR1AIP1Q5JTV8 583 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.1■□□□□ 0.49
SMC4-209ENST00000468653 LRIF1Q5T3J3 769 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 ANXA8L1Q5VT79 327 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 UBE3DQ7Z6J8 389 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 C11orf74Q86VG3 221 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 SPATA24Q86W54 205 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 DHFR2Q86XF0 187 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 C1orf210Q8IVY1 113 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 ZUFSPQ96AP4 578 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 PPCDCQ96CD2 204 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 GBP5Q96PP8 586 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 PANX1Q96RD7 426 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 ECSITQ9BQ95 431 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 THUMPD3Q9BV44 507 aaKnown RBP18.1■□□□□ 0.49
SMC4-209ENST00000468653 KLHL25Q9H0H3 589 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 KLHL31Q9H511 634 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 ATAD3AQ9NVI7 634 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 SLC25A37Q9NYZ2 338 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 ANKMY1Q9P2S6 941 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 STX18Q9P2W9 335 aaKnown RBP18.1■□□□□ 0.49
SMC4-209ENST00000468653 ADAM29Q9UKF5 820 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 EXO1Q9UQ84 846 aaKnown RBP18.1■□□□□ 0.49
SMC4-209ENST00000468653 PCDHB14Q9Y5E9 798 aa18.1■□□□□ 0.49
SMC4-209ENST00000468653 OR5K3A6NET4 321 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 PPM1DO15297 605 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 NOBOXO60393 691 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 GSNP06396 782 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 FURINP09958 794 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 SSR2P43308 183 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 FASLGP48023 281 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 SELPLGQ14242 412 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 GTDC1Q4AE62 458 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 RUNDC3AQ59EK9 446 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 MSRB3Q8IXL7 192 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 GAB3Q8WWW8 586 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 MIEF2Q96C03 454 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms