RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TUBB2BQ9BVA1 445 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 RAB33BQ9H082 229 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 ZBTB20Q9HC78 741 aaPredicted RBP3.98□□□□□ -1.77
SSR3-204ENST00000467733 VPS18Q9P253 973 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 PCDHA7Q9UN72 937 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 USP22Q9UPT9 525 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 KCNK6Q9Y257 313 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 PADI2Q9Y2J8 665 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 PCDHGB6Q9Y5F9 930 aa3.98□□□□□ -1.77
SSR3-204ENST00000467733 PCYT1BQ9Y5K3 369 aaPredicted RBP3.98□□□□□ -1.77
SSR3-204ENST00000467733 TRGV8A0A0C4DH27 118 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 A0A1W2PQ67 120 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 TLCD2A6NGC4 264 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 NPIPB15A6NHN6 443 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 AQP7P3A6NL99 342 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 C9J4A7 227 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 H0YIZ8 118 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 RAB27BO00194 218 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CCL21O00585 134 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CREB3O43889 395 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SOCS5O75159 536 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 JTBO76095 146 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CLDN14O95500 239 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 VIPP01282 170 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 TUBB4AP04350 444 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CYP2A6P11509 494 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 TPH1P17752 444 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 TNFAIP3P21580 790 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 ACVR2AP27037 513 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 PCSK6P29122 969 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 MPGP29372 298 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CDH5P33151 784 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 PBX1P40424 430 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 HADHAP40939 763 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 GABRB2P47870 512 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CARSP49589 748 aaKnown RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 CLCNKAP51800 687 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SMSP52788 366 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SUMO2P61956 95 aaKnown RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 PPP1CAP62136 330 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 ADORA2A-AS1P86434 159 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 FOXD4Q12950 439 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 GPR18Q14330 331 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 INAQ16352 499 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 LONRF1Q17RB8 773 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 ZIK1Q3SY52 487 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 COBLL1Q53SF7 1204 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 PLEKHS1Q5SXH7 462 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 PLEKHA7Q6IQ23 1121 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 RPUSD3Q6P087 351 aaKnown RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 IGFL2Q6UWQ7 119 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 GFRALQ6UXV0 394 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CERS6Q6ZMG9 384 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 ARCQ7LC44 396 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 PHLDB2Q86SQ0 1253 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 BIVMQ86UB2 503 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 CAND1Q86VP6 1230 aaKnown RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 KRT73Q86Y46 540 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SYTL1Q8IYJ3 562 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 KRT78Q8N1N4 520 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 UMODL1-AS1Q8N2C9 162 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SLC38A9Q8NBW4 561 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 DNAJB14Q8TBM8 379 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 TMEM171Q8WVE6 324 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SHC3Q92529 594 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 NR4A3Q92570 626 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 SNX21Q969T3 373 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 NTAN1Q96AB6 310 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 AP2M1Q96CW1 435 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 ZNF501Q96CX3 271 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 GBP5Q96PP8 586 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 MCCC1Q96RQ3 725 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 CD180Q99467 661 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 MLPHQ9BV36 600 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 CINPQ9BW66 212 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 ABCG8Q9H221 673 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 OSGEPL1Q9H4B0 414 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 FAM83DQ9H4H8 585 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 RMI1Q9H9A7 625 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 UBE2TQ9NPD8 197 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 DUSP22Q9NRW4 184 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 POT1Q9NUX5 634 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 TUBA8Q9NY65 449 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 ELOVL5Q9NYP7 299 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 HPSEQ9Y251 543 aa3.97□□□□□ -1.77
SSR3-204ENST00000467733 RPH3AQ9Y2J0 694 aaPredicted RBP3.97□□□□□ -1.77
SSR3-204ENST00000467733 ARID1AO14497 2285 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 PHF3Q92576 2039 aaKnown RBP3.96□□□□□ -1.78
SSR3-204ENST00000467733 A0A1B0GVL5 298 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 TRIM49BA6NDI0 452 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 GOLGA8SH3BPF8 625 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 J3KR12 359 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 PEX12O00623 359 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 RRP9O43818 475 aaKnown RBP3.96□□□□□ -1.78
SSR3-204ENST00000467733 PALMO75781 387 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 KLF7O75840 302 aaPredicted RBP3.96□□□□□ -1.78
SSR3-204ENST00000467733 MTA2O94776 668 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 ATP1A1P05023 1023 aaKnown RBP3.96□□□□□ -1.78
SSR3-204ENST00000467733 KRT9P35527 623 aa3.96□□□□□ -1.78
SSR3-204ENST00000467733 USP8P40818 1118 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms