RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ARHGAP17Q68EM7 881 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TCEAL6Q6IPX3 200 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TDHQ8IZJ6 230 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 CHCHD4Q8N4Q1 142 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 ST7LQ8TDW4 575 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 SAP25Q8TEE9 199 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 CASP10Q92851 521 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZNF501Q96CX3 271 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 GMPPAQ96IJ6 420 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 EPSTI1Q96J88 318 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 MAGED4Q96JG8 741 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 LURAP1Q96LR2 239 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRIM7Q9C029 511 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 RAB9BQ9NP90 201 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 DNAJC11Q9NVH1 559 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 RNF186Q9NXI6 227 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TMOD3Q9NYL9 352 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 EPHA6Q9UF33 1036 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 APPL1Q9UKG1 709 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 SATB2Q9UPW6 733 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 FOXA2Q9Y261 457 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 KIAA1217Q5T5P2 1943 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 GTPBP10A4D1E9 387 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 H0YIG0 161 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC1A7O00341 560 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZBTB14O43829 449 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 AMBPP02760 352 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 HMOX1P09601 288 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 CPA3P15088 417 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 HOXB6P17509 224 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 CYP3A5P20815 502 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 SRD5A2P31213 254 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 NR0B1P51843 470 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 TSTA3Q13630 321 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 MAPK11Q15759 364 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 HFEQ30201 348 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 IFI44LQ53G44 452 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 OR4C11Q6IEV9 310 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC27A4Q6P1M0 643 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 FIP1L1Q6UN15 594 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 SIGLEC15Q6ZMC9 328 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 CYP4V2Q6ZWL3 525 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 BTN2A1Q7KYR7 527 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRMT11Q7Z4G4 463 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 HOGA1Q86XE5 327 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 PEX5LQ8IYB4 626 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 THEM5Q8N1Q8 247 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 RAB42Q8N4Z0 105 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 TCEANCQ8N8B7 351 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 OR8H1Q8NGG4 311 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 CHURC1Q8WUH1 139 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 DNASE2BQ8WZ79 361 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 SEPT8Q92599 483 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 GGHQ92820 318 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 AZIN2Q96A70 460 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 ULK4Q96C45 1275 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 OMA1Q96E52 524 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 GUCD1Q96NT3 240 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 NECTIN4Q96NY8 510 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 NAP1L3Q99457 506 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 CCM2Q9BSQ5 444 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 LRRC2Q9BYS8 371 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC39A8Q9C0K1 460 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 DPEP2Q9H4A9 486 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 POLKQ9UBT6 870 aa3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 MYH14Q7Z406 1995 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-211ENST00000466538 UMODL1Q5DID0 1318 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 RNF123Q5XPI4 1314 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 A0A087WZ39 114 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TMEM129A0AVI4 362 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 BICDL2A1A5D9 508 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 MEIOCA2RUB1 952 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 C15orf61A6NNL5 157 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 CEACAM4O75871 244 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 GAS8O95995 478 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 MMP10P09238 476 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 SBK2P0C263 348 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 MYOGP15173 224 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 SOX3P41225 446 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC1A3P43003 542 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 NT5C2P49902 561 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 PAX9P55771 341 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 GUCY2DQ02846 1103 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 GABPAQ06546 454 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 CDH18Q13634 790 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 PDE7AQ13946 482 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TMEM132DQ14C87 1099 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 SGSM1Q2NKQ1 1148 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 FAM106AQ4KMX7 169 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 ATP1A1-AS1Q5TC04 95 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 PLPP4Q5VZY2 271 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZNF776Q68DI1 518 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 ETFRF1Q6IPR1 90 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TATDN1Q6P1N9 297 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 RFPL4BQ6ZWI9 263 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 C5orf24Q7Z6I8 188 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZNF410Q86VK4 478 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 SFRP1Q8N474 314 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TEX26Q8N6G2 289 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms