RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DNAJB6O75190 326 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 JAK1P23458 1154 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 CD96P40200 585 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 CA7P43166 264 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 SCTRP47872 440 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 TAS2R50P59544 299 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 MORF4L2Q15014 288 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18■□□□□ 0.473e-8■■■□□ 16
COL9A3-206ENST00000466532 SBSNQ6UWP8 590 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 ABHD13Q7L211 337 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 ITLN2Q8WWU7 325 aaPredicted RBP18■□□□□ 0.47
COL9A3-206ENST00000466532 PDLIM5Q96HC4 596 aaKnown RBP18■□□□□ 0.47
COL9A3-206ENST00000466532 WDR83Q9BRX9 315 aaKnown RBP18■□□□□ 0.47
COL9A3-206ENST00000466532 TRMT1Q9NXH9 659 aaKnown RBP18■□□□□ 0.47
COL9A3-206ENST00000466532 DYRK1BQ9Y463 629 aa18■□□□□ 0.47
COL9A3-206ENST00000466532 GABRR3A8MPY1 467 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 FAM227AF5H4B4 570 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 B4GALT2O60909 372 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 WISP2O76076 250 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 CD46P15529 392 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 TCP1P17987 556 aaKnown RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 SAT1P21673 171 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 EEF1DP29692 281 aaKnown RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 AHRP35869 848 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 REEP5Q00765 189 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 OC90Q02509 493 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 ART3Q13508 389 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 STEAP4Q687X5 459 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 SPINK14Q6IE38 97 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 MTFR2Q6P444 385 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 MRGPRGQ86SM5 289 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 THOC6Q86W42 341 aaKnown RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 KLHL7Q8IXQ5 586 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 SRRM1Q8IYB3 904 aaKnown RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 TMEM178AQ8NBL3 297 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 UTP15Q8TED0 518 aaKnown RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 SCMH1Q96GD3 660 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 PTCHD1Q96NR3 888 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 UNKQ9C0B0 810 aaKnown RBP17.99■□□□□ 0.47
COL9A3-206ENST00000466532 CDCP1Q9H5V8 836 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 TEX264Q9Y6I9 313 aa17.99■□□□□ 0.47
COL9A3-206ENST00000466532 NDC80O14777 642 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 SLC19A2O60779 497 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 PRF1P14222 555 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 ZNF37AP17032 561 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-206ENST00000466532 TNFRSF8P28908 595 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 HNF4AP41235 474 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 CASP6P55212 293 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 RAB8AP61006 207 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 ALDH6A1Q02252 535 aaKnown RBP17.98■□□□□ 0.47
COL9A3-206ENST00000466532 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-206ENST00000466532 PPP1R3AQ16821 1122 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 TMPRSS11BQ86T26 416 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 CYP4X1Q8N118 509 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 LGI4Q8N135 537 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 HORMAD2Q8N7B1 307 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 ANKRD53Q8N9V6 530 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 ELP5Q8TE02 316 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 LRRC39Q96DD0 335 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 CAPZA3Q96KX2 299 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 AIF1LQ9BQI0 150 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 PELI2Q9HAT8 420 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 ZFATQ9P243 1243 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 SLC22A14Q9Y267 594 aa17.98■□□□□ 0.47
COL9A3-206ENST00000466532 CACNA1CQ13936 2221 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 CTAGE15A4D2H0 777 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 NPEPPSL1A6NEC2 478 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 URADA6NGE7 173 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 CDC7O00311 574 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 PRMT3O60678 531 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 MLYCDO95822 493 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 GRNP28799 593 aaKnown RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 ITGA8P53708 1063 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 ARL4CP56559 192 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 BTG2P78543 158 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 DR1Q01658 176 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 RBBP5Q15291 538 aaKnown RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 QSOX2Q6ZRP7 698 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 SYDE1Q6ZW31 735 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 GALNTL5Q7Z4T8 443 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 CTAGE6Q86UF2 777 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 RPS19BP1Q86WX3 136 aaKnown RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 ANKMY2Q8IV38 441 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 KIF2BQ8N4N8 673 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 ZNF808Q8N4W9 903 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 FAM98AQ8NCA5 519 aaKnown RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 TRPV3Q8NET8 790 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 MAGED4Q96JG8 741 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 GPR137Q96N19 417 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 EGFL8Q99944 293 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 TRIM51Q9BSJ1 452 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 SLC6A16Q9GZN6 736 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 TSPAN10Q9H1Z9 355 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 LRFN1Q9P244 771 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 KLF2Q9Y5W3 355 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-206ENST00000466532 PSAT1Q9Y617 370 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 KCNE2Q9Y6J6 123 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 ABCA12Q86UK0 2595 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 APCP25054 2843 aa17.97■□□□□ 0.47
COL9A3-206ENST00000466532 FAM95CA0A1B0GW59 222 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms