RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TMEM45AQ9NWC5 275 aa11.58□□□□□ -0.56
VPS16-206ENST00000466415 MCM8Q9UJA3 840 aa11.58□□□□□ -0.56
VPS16-206ENST00000466415 MAPRE3Q9UPY8 281 aa11.58□□□□□ -0.56
VPS16-206ENST00000466415 BTBD3Q9Y2F9 522 aa11.58□□□□□ -0.56
VPS16-206ENST00000466415 U3KQA8 63 aa11.58□□□□□ -0.56
VPS16-206ENST00000466415 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.56
VPS16-206ENST00000466415 BDP1A6H8Y1 2624 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 NCOR1O75376 2440 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 A0A088AWK7 358 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 LRIT2A6NDA9 550 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 CCDC154A6NI56 674 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 BBIP1A8MTZ0 92 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 C9JVG2 144 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 H0YGG7 62 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 RTCAO00442 366 aaKnown RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 TXNDC9O14530 226 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 PRAMEF10O60809 474 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 CPNE6O95741 557 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 LMNAP02545 664 aaKnown RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 C9P02748 559 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 ZNF10P21506 573 aaPredicted RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 POLR2JP52435 117 aaKnown RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 MAPK12P53778 367 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 VSX2P58304 361 aaPredicted RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 ARF3P61204 181 aaPredicted RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 RAE1P78406 368 aaKnown RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 CCL7P80098 99 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 STX5Q13190 355 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 SLC14A1Q13336 389 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 HKDC1Q2TB90 917 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 TMTC4Q5T4D3 741 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 OR4C11Q6IEV9 310 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 FRMPD2BQ6IN97 320 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 GALNT18Q6P9A2 607 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 ABHD13Q7L211 337 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 PRSS42Q7Z5A4 293 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 MCATQ8IVS2 390 aaKnown RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 OR2L5Q8NG80 312 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 MS4A6EQ96DS6 147 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 MACROD1Q9BQ69 325 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 TBCDQ9BTW9 1192 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 SORBS1Q9BX66 1292 aaKnown RBP11.57□□□□□ -0.56
VPS16-206ENST00000466415 SLC6A16Q9GZN6 736 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 ROGDIQ9GZN7 287 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 SEMA4GQ9NTN9 838 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 FAM86C1Q9NVL1 165 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 SIRT5Q9NXA8 310 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 BAIAP2L1Q9UHR4 511 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 ADAM29Q9UKF5 820 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 PILRAQ9UKJ1 303 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 PLCL2Q9UPR0 1127 aa11.57□□□□□ -0.56
VPS16-206ENST00000466415 LOC105369274A0A096LPK9 316 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 IGHV5-51A0A0C4DH38 117 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 A0A0G2JN53 185 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 LOC102723532A0A0G2JNH3 316 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 DYTNA2CJ06 578 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 A8MU76 341 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 CFLARO15519 480 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 ZSCAN9O15535 394 aaPredicted RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 P2RX6O15547 441 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 AKAP10O43572 662 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 PRMT3O60678 531 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 LRP3O75074 770 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 LRATO95237 230 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 TBX6O95947 436 aaPredicted RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 GBAP04062 536 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 ZNF888P0CJ79 500 aaPredicted RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 CKMT2P17540 419 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 DDX5P17844 614 aaKnown RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 PRPS1L1P21108 318 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 TACR1P25103 407 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 RPL3P39023 403 aaKnown RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 GSTM5P46439 218 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 SEPHS1P49903 392 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 NUDT2P50583 147 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 ARFIP1P53367 373 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 CLDN8P56748 225 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 NCALDP61601 193 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 ART3Q13508 389 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 RCAN2Q14206 197 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 CSRP2Q16527 193 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 CLPPQ16740 277 aaPredicted RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 SPRED3Q2MJR0 410 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 ADPRMQ3LIE5 342 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 TIGD2Q4W5G0 525 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 REP15Q6BDI9 236 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 TMEM71Q6P5X7 295 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 KMT5CQ86Y97 462 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 NAXDQ8IW45 347 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 OR4N4Q8N0Y3 316 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 TMEM132CQ8N3T6 1108 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 DNAJC22Q8N4W6 341 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 GFM2Q969S9 779 aaKnown RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 KLHL29Q96CT2 875 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 RCN3Q96D15 328 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 TM4SF19Q96DZ7 209 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 SPDL1Q96EA4 605 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 SLC45A3Q96JT2 553 aa11.56□□□□□ -0.56
VPS16-206ENST00000466415 GFM1Q96RP9 751 aaKnown RBP11.56□□□□□ -0.56
VPS16-206ENST00000466415 NUDT22Q9BRQ3 303 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms