RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 HS6ST1O60243 411 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 LCMT2O60294 686 aaKnown RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 FHP07954 510 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 HOXD4P09016 255 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 SLC35G6P0C7Q6 338 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 ENO3P13929 434 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 NR0B1P51843 470 aaKnown RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 SNX1Q13596 522 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 TMEM211Q6ICI0 200 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 ZNF549Q6P9A3 640 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 CYHR1Q6ZMK1 362 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 PIWIL4Q7Z3Z4 852 aaKnown RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 SLC13A5Q86YT5 568 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 TGIF2LYQ8IUE0 185 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 CCDC71Q8IV32 467 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 SULF2Q8IWU5 870 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 MMP21Q8N119 569 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 ZFP62Q8NB50 900 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 NFAM1Q8NET5 270 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 CD200R1Q8TD46 325 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 TMEM125Q96AQ2 219 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 TBC1D20Q96BZ9 403 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 SEC16BQ96JE7 1060 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 FOXC2Q99958 501 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 TP63Q9H3D4 680 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 TSPY26PQ9H489 355 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 INTS10Q9NVR2 710 aaKnown RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 KLHL42Q9P2K6 505 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 KLF13Q9Y2Y9 288 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-208ENST00000465721 ZANQ9Y493 2812 aa11.01□□□□□ -0.65
CNOT4-208ENST00000465721 IGKV3D-11A0A0A0MRZ8 115 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 CDC40O60508 579 aaKnown RBP eCLIP11□□□□□ -0.65
CNOT4-208ENST00000465721 GALR3O60755 368 aaPredicted RBP11□□□□□ -0.65
CNOT4-208ENST00000465721 DNAJB6O75190 326 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 CDH1P12830 882 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 NUP107P57740 925 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 OLR1P78380 273 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 BASP1P80723 227 aaKnown RBP11□□□□□ -0.65
CNOT4-208ENST00000465721 HERC3Q15034 1050 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 SIX1Q15475 284 aaPredicted RBP11□□□□□ -0.65
CNOT4-208ENST00000465721 SEL1L2Q5TEA6 688 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 ZNF470Q6ECI4 717 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 CAPN13Q6MZZ7 669 aaPredicted RBP11□□□□□ -0.65
CNOT4-208ENST00000465721 ARHGAP11AQ6P4F7 1023 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 MBOAT1Q6ZNC8 495 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 UBE2R2Q712K3 238 aaPredicted RBP11□□□□□ -0.65
CNOT4-208ENST00000465721 KIAA1328Q86T90 577 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 C17orf64Q86WR6 236 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 CPNE9Q8IYJ1 553 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 MFSD9Q8NBP5 474 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 ZNF740Q8NDX6 193 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 SLC13A3Q8WWT9 602 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 RND1Q92730 232 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 KCNJ9Q92806 393 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 FAM129AQ9BZQ8 928 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 TRIM5Q9C035 493 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 KCNJ16Q9NPI9 418 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 DRG1Q9Y295 367 aaKnown RBP11□□□□□ -0.65
CNOT4-208ENST00000465721 NINQ8N4C6 2090 aa11□□□□□ -0.65
CNOT4-208ENST00000465721 TCRBV7S3A2A0A539 114 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 TCRBV16S1A1N1A0A5B0 115 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 AP3B1O00203 1094 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 FCHO1O14526 889 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 ZBTB14O43829 449 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 PEX1O43933 1283 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 KLK8O60259 260 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 PRMT3O60678 531 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 B3GALT4O96024 378 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 KLK2P20151 261 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 TPSB2P20231 275 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 JAK1P23458 1154 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 GPR85P60893 370 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 FOLH1Q04609 750 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 MYBPHQ13203 477 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 TPSAB1Q15661 275 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 DEFB134Q4QY38 66 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 NEPROQ6NW34 567 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 QSOX2Q6ZRP7 698 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 MDGA2Q7Z553 956 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 DENND6AQ8IWF6 608 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 CYP4Z2PQ8N1L4 340 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 APCDD1LQ8NCL9 501 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 OR52N2Q8NGI0 321 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 NINJ1Q92982 152 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 GPR21Q99679 349 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 SARGQ9BW04 601 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 SGPP1Q9BX95 441 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 PCBD2Q9H0N5 130 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 DLL4Q9NR61 685 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 FBXO6Q9NRD1 293 aaPredicted RBP10.99□□□□□ -0.65
CNOT4-208ENST00000465721 ADAMTS6Q9UKP5 1117 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 DHRS7Q9Y394 339 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 L3MBTL1Q9Y468 752 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 DOCK7Q96N67 2140 aa10.99□□□□□ -0.65
CNOT4-208ENST00000465721 KLRC4-KLRK1H3BQV0 150 aa10.98□□□□□ -0.65
CNOT4-208ENST00000465721 EIF3FO00303 357 aaPredicted RBP10.98□□□□□ -0.65
CNOT4-208ENST00000465721 NDUFS4O43181 175 aa10.98□□□□□ -0.65
CNOT4-208ENST00000465721 CHST10O43529 356 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms