RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 BNC2Q6ZN30 1099 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 TRIM46Q7Z4K8 759 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 HEATR4Q86WZ0 1026 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 DEFB107AQ8IZN7 70 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 TEX19Q8NA77 164 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 PHC3Q8NDX5 983 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 ESAMQ96AP7 390 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 ROPN1LQ96C74 230 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 RCN3Q96D15 328 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 MARK4Q96L34 752 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 LGR4Q9BXB1 951 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 SPRY4Q9C004 299 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 DENND2DQ9H6A0 471 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 DCLRE1BQ9H816 532 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 ASIC5Q9NY37 505 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 GPRC5BQ9NZH0 403 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 AKAP7Q9P0M2 348 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 VPS4AQ9UN37 437 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 KCNMB2Q9Y691 235 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 PIKFYVEQ9Y2I7 2098 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 A0A088AWK7 358 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 A0A1B0GTL3 188 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 NPIPB8E9PQR5 432 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 AIM2O14862 343 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 POP7O75817 140 aaKnown RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ALDOCP09972 364 aaKnown RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 MYCLP1P12525 358 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ACPPP15309 386 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF8P17098 575 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 TRIM23P36406 574 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 HSD17B2P37059 387 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 NR1D2Q14995 579 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 NR6A1Q15406 480 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 C18orf21Q32NC0 220 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 PTCHD3Q3KNS1 767 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 SPATS1Q496A3 300 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 PRR30Q53SZ7 412 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 C6orf136Q5SQH8 315 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF648Q5T619 568 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 PGM2L1Q6PCE3 622 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ASB18Q6ZVZ8 466 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 AMZ2Q86W34 360 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 C17orf82Q86X59 251 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF761Q86XN6 746 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 NRROSQ86YC3 692 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 TICAM1Q8IUC6 712 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 CFAP206Q8IYR0 622 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 DSELQ8IZU8 1212 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 NLGN4XQ8N0W4 816 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 FBXW8Q8N3Y1 598 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 ENDOVQ8N8Q3 282 aaKnown RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 AGBL5Q8NDL9 886 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 NLGN4YQ8NFZ3 816 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-215ENST00000465457 FBXO27Q8NI29 283 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 RNPEPL1Q9HAU8 725 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 APMAPQ9HDC9 416 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 GPR45Q9Y5Y3 372 aa13.26□□□□□ -0.29
HDAC6-215ENST00000465457 CROCCQ5TZA2 2017 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 APCP25054 2843 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF839A8K0R7 811 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 MANBAO00462 879 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 MRASO14807 208 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 CLGNO14967 610 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ANGPT2O15123 496 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 NRP2O60462 931 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 PEX11AO75192 247 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 DNAJB5O75953 348 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 HOXC4P09017 264 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 PRPH2P23942 346 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 AK4P27144 223 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 MAPK1P28482 360 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 PBLDP30039 288 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 HNF4AP41235 474 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 GDF5P43026 501 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 PREPP48147 710 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 MTTPP55157 894 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 RIPPLY3P57055 190 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 KCNK10P57789 538 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ACTR3P61158 418 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 FOXM1Q08050 763 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 DMPKQ09013 629 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ABRQ12979 859 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 GRB7Q14451 532 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 IMPG1Q17R60 797 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 AGTRAPQ6RW13 159 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 MBOAT1Q6ZNC8 495 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 GK5Q6ZS86 529 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 TRIM74Q86UV6 250 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF547Q8IVP9 402 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 FNDC5Q8NAU1 212 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 GALNT11Q8NCW6 608 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 OR56A3Q8NH54 315 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 CPT1CQ8TCG5 803 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms