RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 NXT1Q9UKK6 140 aaKnown RBP16.16■□□□□ 0.18
VPS52-215ENST00000464425 MASP2O00187 686 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 PEX12O00623 359 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 SFTPCP11686 197 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 CREB1P16220 341 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 EPORP19235 508 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 ATP5F1P24539 256 aaPredicted RBP16.15■□□□□ 0.18
VPS52-215ENST00000464425 AHRP35869 848 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 KLC1Q07866 573 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 RGS1Q08116 209 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 AGBL2Q5U5Z8 902 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 LRRC70Q7Z2Q7 622 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 LAPTM4BQ86VI4 370 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 SLC22A9Q8IVM8 553 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 APLFQ8IW19 511 aaPredicted RBP16.15■□□□□ 0.18
VPS52-215ENST00000464425 SHISA5Q8N114 240 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 ZNF843Q8N446 348 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 TLCD1Q96CP7 247 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 CCDC126Q96EE4 140 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 ABHD17AQ96GS6 310 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 ANKHQ9HCJ1 492 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 ZNF71Q9NQZ8 489 aaPredicted RBP16.15■□□□□ 0.18
VPS52-215ENST00000464425 ACSS2Q9NR19 701 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 ZNF446Q9NWS9 450 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 MAP4K5Q9Y4K4 846 aa16.15■□□□□ 0.18
VPS52-215ENST00000464425 SCN3AQ9NY46 2000 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 IGLV3-12A0A075B6K2 115 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 LRRC14BA6NHZ5 514 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 A6NL46 340 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 G3V2L1 256 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 H0YIG0 161 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 SPAG7O75391 227 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 SASH3O75995 380 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 NSA2O95478 260 aaKnown RBP16.14■□□□□ 0.17
VPS52-215ENST00000464425 B3GALT4O96024 378 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 MMP11P24347 488 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 PCDH1Q08174 1060 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 NFATC3Q12968 1075 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 DOC2AQ14183 400 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 TMIGD1Q6UXZ0 262 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 PDSS2Q86YH6 399 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.14■□□□□ 0.17
VPS52-215ENST00000464425 KRT78Q8N1N4 520 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 TEX9Q8N6V9 391 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 C9orf43Q8TAL5 461 aaPredicted RBP16.14■□□□□ 0.17
VPS52-215ENST00000464425 NT5CQ8TCD5 201 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 TCP10LQ8TDR4 215 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 CCT6BQ92526 530 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 CRB3Q9BUF7 120 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 C1QTNF3Q9BXJ4 246 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 SLC25A18Q9H1K4 315 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 ACBD3Q9H3P7 528 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 KLHL31Q9H511 634 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 MKKSQ9NPJ1 570 aaPredicted RBP16.14■□□□□ 0.17
VPS52-215ENST00000464425 P4HTMQ9NXG6 502 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 HCN3Q9P1Z3 774 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 OPTCQ9UBM4 332 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 MID2Q9UJV3 735 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 C3orf18Q9UK00 162 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 NAALAD2Q9Y3Q0 740 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 SLC22A7Q9Y694 548 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 MED13Q9UHV7 2174 aa16.14■□□□□ 0.17
VPS52-215ENST00000464425 ZNF860A6NHJ4 632 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 A8MT66 165 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 MKRN2OSH3BPM6 223 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 K7EM74 188 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 K7EPI3 171 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 ATP8B1O43520 1251 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 DLX3O60479 287 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 RDH16O75452 317 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 KLHL18O94889 574 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 ZNF888P0CJ79 500 aaPredicted RBP16.13■□□□□ 0.17
VPS52-215ENST00000464425 MYL2P10916 166 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 SLC18A1P54219 525 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 PRKAA2P54646 552 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 IRF8Q02556 426 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 CHIT1Q13231 466 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 HERC3Q15034 1050 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 RBBP7Q16576 425 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 ZYG11AQ6WRX3 759 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 MED25Q71SY5 747 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 GOLGA6L1Q8N7Z2 621 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 PTGR2Q8N8N7 351 aaPredicted RBP16.13■□□□□ 0.17
VPS52-215ENST00000464425 TMEM102Q8N9M5 508 aaPredicted RBP16.13■□□□□ 0.17
VPS52-215ENST00000464425 TRPV3Q8NET8 790 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 OR51Q1Q8NH59 317 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 CREB3L4Q8TEY5 395 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 ZBTB9Q96C00 473 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 PHF21BQ96EK2 531 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 PTCD3Q96EY7 689 aaKnown RBP16.13■□□□□ 0.17
VPS52-215ENST00000464425 IP6K3Q96PC2 410 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 MESP1Q9BRJ9 268 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 EHD1Q9H4M9 534 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 SEMA3GQ9NS98 782 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 TUBD1Q9UJT1 453 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 ZNF490Q9ULM2 529 aaPredicted RBP16.13■□□□□ 0.17
VPS52-215ENST00000464425 ANGPTL3Q9Y5C1 460 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 HS3ST3B1Q9Y662 390 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 PCSK5Q92824 1860 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 BOD1L1Q8NFC6 3051 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms