RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 AHSPQ9NZD4 102 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 H0YAE9 185 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 H3BQ06 376 aaPredicted RBP20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 H3BSA7 217 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 SAP18O00422 153 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 YY2O15391 372 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 HOXB6P17509 224 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 ENGP17813 658 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 GPX2P18283 190 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 NDUFV2P19404 249 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 RAB28P51157 221 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 KRT33BQ14525 404 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 ABRAXAS1Q6UWZ7 409 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 TMEM92Q6UXU6 159 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 GPR141Q7Z602 305 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 PATL1Q86TB9 770 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 C10orf111Q8N326 155 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 DHRSXQ8N5I4 330 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 LINC01555Q8NAE3 123 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 OR2L8Q8NGY9 312 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 PNPT1Q8TCS8 783 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 FGF22Q9HCT0 170 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 EXO1Q9UQ84 846 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 PCDHB11Q9Y5F2 797 aa20.83■□□□□ 0.93
PDLIM2-216ENST00000464275 LRP4O75096 1905 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 FANCMQ8IYD8 2048 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 PRSS38A1L453 326 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 RNASET2O00584 256 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 PSMB5P28074 263 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 PKLRP30613 574 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 RPS9P46781 194 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 RPS6KA3P51812 740 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 ZBED5Q49AG3 693 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 FBXO30Q8TB52 745 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 NCLNQ969V3 563 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 OR2M4Q96R27 311 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 DCAF13Q9NV06 445 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 ATAD3AQ9NVI7 634 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 SH3BP4Q9P0V3 963 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 MMP17Q9ULZ9 603 aa20.83■□□□□ 0.92
PDLIM2-216ENST00000464275 SNRNP200O75643 2136 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 POM121BA6NF01 834 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 PDZK1P1A8MUH7 402 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 PLOD2O00469 737 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 SEMA3DO95025 777 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 IGFBP4P22692 258 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 PPIBP23284 216 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 C2orf80Q0P641 193 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 IER5LQ5T953 404 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 FAM71E1Q6IPT2 247 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 ERICH5Q6P6B1 374 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 SLC9B2Q86UD5 537 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 MTERF3Q96E29 417 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 CARS2Q9HA77 564 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 HEBP2Q9Y5Z4 205 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 GMEB1Q9Y692 573 aa20.82■□□□□ 0.92
PDLIM2-216ENST00000464275 CLOCKO15516 846 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 DEAF1O75398 565 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 KLK1P06870 262 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 IL1RNP18510 177 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 CLDN2P57739 230 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 SLC14A1Q13336 389 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 PDE7AQ13946 482 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 NFATC4Q14934 902 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ENPP6Q6UWR7 440 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ZNF551Q7Z340 670 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 GPR155Q7Z3F1 870 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ZNF786Q8N393 782 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 SLC47A1Q96FL8 570 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 MSANTD3Q96H12 275 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 MS4A8Q9BY19 250 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 CD93Q9NPY3 652 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 CORO2BQ9UQ03 480 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ERVK-11Q9UQG0 969 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 LRRC72A6NJI9 287 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 H7BY64 318 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 KLHL18O94889 574 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 GBAP04062 536 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 FURINP09958 794 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ACSL1P33121 698 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 TPMTP51580 245 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 RPE65Q16518 533 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ZNF385BQ569K4 471 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 DEPDC1Q5TB30 811 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 KHDRBS2Q5VWX1 349 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 CPZQ66K79 652 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ENPP7Q6UWV6 458 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 IKBIPQ70UQ0 350 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ANKRD53Q8N9V6 530 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 NETO1Q8TDF5 533 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 WDR92Q96MX6 357 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 RDH12Q96NR8 316 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 PRAP1Q96NZ9 151 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 SPATA9Q9BWV2 254 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 MAGIXQ9H6Y5 334 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 ZNF282Q9UDV7 671 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 VPS4AQ9UN37 437 aa20.81■□□□□ 0.92
PDLIM2-216ENST00000464275 A0A1B0GTW7 788 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 TCRBV21S2A2A0A5A6 115 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 EI24O14681 340 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms