RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RAB8AP61006 207 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 SKP1P63208 163 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 CDKL1Q00532 357 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 REEP5Q00765 189 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 SRSF11Q05519 484 aaKnown RBP17.74■□□□□ 0.43
SF3A1-205ENST00000463818 NIPAL1Q6NVV3 410 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 ABHD13Q7L211 337 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 CTAGE6Q86UF2 777 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 CEP97Q8IW35 865 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 TRPV3Q8NET8 790 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 DNAJB8Q8NHS0 232 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 VPS39Q96JC1 886 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 LPAR4Q99677 370 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 RHOJQ9H4E5 214 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 MMP25Q9NPA2 562 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 SMYD2Q9NRG4 433 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 NSMCE4AQ9NXX6 385 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 CTNNAL1Q9UBT7 734 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 OARD1Q9Y530 152 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 NDC80O14777 642 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 FANCGO15287 622 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 B4GALT2O60909 372 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 CRYABP02511 175 aaKnown RBP17.73■□□□□ 0.43
SF3A1-205ENST00000463818 PER3P56645 1201 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 OR4D2P58180 307 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 TSNQ15631 228 aaKnown RBP17.73■□□□□ 0.43
SF3A1-205ENST00000463818 MEP1AQ16819 746 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 C18orf21Q32NC0 220 aaPredicted RBP17.73■□□□□ 0.43
SF3A1-205ENST00000463818 ZNF787Q6DD87 383 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 TMPRSS11BQ86T26 416 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 CRLF3Q8IUI8 442 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 BEST3Q8N1M1 668 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 BBOF1Q8ND07 529 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 PYROXD1Q8WU10 500 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 NPAS2Q99743 824 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 MCMBPQ9BTE3 642 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 KLHL31Q9H511 634 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 GPAMQ9HCL2 828 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 ABI3Q9P2A4 366 aa17.73■□□□□ 0.43
SF3A1-205ENST00000463818 MTO1Q9Y2Z2 717 aaKnown RBP17.73■□□□□ 0.43
SF3A1-205ENST00000463818 SVILO95425 2214 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 A0A1B0GUH1 482 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 URADA6NGE7 173 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 H2AFYO75367 372 aaKnown RBP17.72■□□□□ 0.43
SF3A1-205ENST00000463818 SMIM10L1P0DMW3 83 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 MST1P26927 711 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 CD96P40200 585 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 GDF5P43026 501 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 HNMTP50135 292 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 ST13P50502 369 aaKnown RBP17.72■□□□□ 0.43
SF3A1-205ENST00000463818 SLC12A2P55011 1212 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 HYAL2Q12891 473 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 USP10Q14694 798 aaKnown RBP17.72■□□□□ 0.43
SF3A1-205ENST00000463818 ZNF766Q5HY98 468 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 GFRALQ6UXV0 394 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 RHBDF1Q96CC6 855 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 SMIM10Q96HG1 83 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 PTCHD1Q96NR3 888 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 ERP44Q9BS26 406 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 UNKQ9C0B0 810 aaKnown RBP17.72■□□□□ 0.43
SF3A1-205ENST00000463818 SLC6A16Q9GZN6 736 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 DPH5Q9H2P9 285 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 CLK4Q9HAZ1 481 aaKnown RBP17.72■□□□□ 0.43
SF3A1-205ENST00000463818 POPDC3Q9HBV1 291 aa17.72■□□□□ 0.43
SF3A1-205ENST00000463818 FAM187AA6NFU0 413 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 CXorf49A8MYA2 514 aaPredicted RBP17.71■□□□□ 0.43
SF3A1-205ENST00000463818 MAN1A2O60476 641 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 PRMT3O60678 531 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 SERPINA6P08185 405 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 C1GALT1C1LP0DN25 315 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 JAK1P23458 1154 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 SSTR1P30872 391 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 DCTP40126 519 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 SLC26A5P58743 744 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 BTG2P78543 158 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 POU4F1Q01851 419 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 TUBA3CQ13748 450 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 C1QL3Q5VWW1 255 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 TUBA3EQ6PEY2 450 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 FRA10AC1Q70Z53 315 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 ADAMTSL2Q86TH1 951 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 FJX1Q86VR8 437 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 CYP4X1Q8N118 509 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 SPATA6LQ8N4H0 392 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 CREB3L4Q8TEY5 395 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 UTP23Q9BRU9 249 aaKnown RBP17.71■□□□□ 0.43
SF3A1-205ENST00000463818 DERL2Q9GZP9 239 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 RHBGQ9H310 441 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 SAYSD1Q9NPB0 183 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 ANKRD10Q9NXR5 420 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 UNC79Q9P2D8 2635 aa17.71■□□□□ 0.43
SF3A1-205ENST00000463818 FAM227AF5H4B4 570 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 ZG16O60844 167 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 WDR47O94967 919 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 UNC5CO95185 931 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 PMP22Q01453 160 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 ILF2Q12905 390 aaKnown RBP17.7■□□□□ 0.42
SF3A1-205ENST00000463818 CALCOCO2Q13137 446 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms