RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TIMMDC1Q9NPL8 285 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 DLL4Q9NR61 685 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 PACSIN2Q9UNF0 486 aaPredicted RBP13.53□□□□□ -0.24
SMC1A-204ENST00000463684 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 EPN1Q9Y6I3 576 aaPredicted RBP13.53□□□□□ -0.24
SMC1A-204ENST00000463684 DNHD1Q96M86 4753 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 MAP1AP78559 2803 aaPredicted RBP13.53□□□□□ -0.24
SMC1A-204ENST00000463684 SAGE2PA6NJ88 616 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 GFYI3L273 518 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 MPC1LP0DKB6 136 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ETS1P14921 441 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ACVR2AP27037 513 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 IMPA1P29218 277 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 COILP38432 576 aaPredicted RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 SKIV2L2P42285 1042 aaKnown RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ZFP36L2P47974 494 aaKnown RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 RPS6KA1Q15418 735 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 NIPAL1Q6NVV3 410 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 CES3Q6UWW8 571 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ARSKQ6UWY0 536 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 UBE2R2Q712K3 238 aaPredicted RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 C17orf64Q86WR6 236 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ZZZ3Q8IYH5 903 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 SYCE1Q8N0S2 351 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ARMC10Q8N2F6 343 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 PRELID2Q8N945 189 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 MFSD3Q96ES6 412 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 CLEC4MQ9H2X3 399 aaPredicted RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 ZNF358Q9NW07 568 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 RPH3AQ9Y2J0 694 aaPredicted RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 L3MBTL1Q9Y468 752 aa13.52□□□□□ -0.25
SMC1A-204ENST00000463684 PRRC2AP48634 2157 aaKnown RBP13.52□□□□□ -0.25
SMC1A-204ENST00000463684 FIGNL2A6NMB9 653 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ACOT7O00154 380 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 PROM1O43490 865 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 CHST10O43529 356 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 GALR3O60755 368 aaPredicted RBP13.51□□□□□ -0.25
SMC1A-204ENST00000463684 TUBB4AP04350 444 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ENO3P13929 434 aaPredicted RBP13.51□□□□□ -0.25
SMC1A-204ENST00000463684 OGNP20774 298 aaKnown RBP13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ARNTP27540 789 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 CLCN2P51788 898 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 CLCN7P51798 805 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 TBPL1P62380 186 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 PPIAP62937 165 aaKnown RBP13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ADAM8P78325 824 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 PLGLB1Q02325 96 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 LTBQ06643 244 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ZNF585AQ6P3V2 769 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 MDGA2Q7Z553 956 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 CAMKMTQ7Z624 323 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 BIVMQ86UB2 503 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ARMC2Q8NEN0 867 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 OR5M9Q8NGP3 310 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 CREB3L4Q8TEY5 395 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
SMC1A-204ENST00000463684 TTYH2Q9BSA4 534 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 KIFC1Q9BW19 673 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 CCDC68Q9H2F9 335 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 KLHL42Q9P2K6 505 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 PLEKHA6Q9Y2H5 1048 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 HCFC1P51610 2035 aa13.51□□□□□ -0.25
SMC1A-204ENST00000463684 ZNF469Q96JG9 3925 aaPredicted RBP13.5□□□□□ -0.25
SMC1A-204ENST00000463684 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 OR14I1A6ND48 311 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 A8MUA0 341 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 BCKDKO14874 412 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 ITGA10O75578 1167 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 ALOX12P18054 663 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 MGAT1P26572 445 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 PEX19P40855 299 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 KIR2DL3P43628 341 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 DLX5P56178 289 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 OLR1P78380 273 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 BTG2P78543 158 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 SNX1Q13596 522 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 CUL1Q13616 776 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 DEFB134Q4QY38 66 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 CYHR1Q6ZMK1 362 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 QSOX2Q6ZRP7 698 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 RGS9BPQ6ZS82 235 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 ZNF740Q8NDX6 193 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 NFAM1Q8NET5 270 aaPredicted RBP13.5□□□□□ -0.25
SMC1A-204ENST00000463684 C1orf54Q8WWF1 131 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
SMC1A-204ENST00000463684 PWWP2AQ96N64 755 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 LACRTQ9GZZ8 138 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 EIF2B3Q9NR50 452 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms