RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-208ENST00000462970 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 PDSS2Q86YH6 399 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 ZC3H7AQ8IWR0 971 aaKnown RBP9.11□□□□□ -0.95
PSMD4-208ENST00000462970 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 TTLQ8NG68 377 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 OR5T3Q8NGG3 340 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 NT5CQ8TCD5 201 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 ADAMTS17Q8TE56 1095 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 PPP4R1Q8TF05 950 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 AENQ8WTP8 325 aaKnown RBP9.11□□□□□ -0.95
PSMD4-208ENST00000462970 ZBTB9Q96C00 473 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 PEX11GQ96HA9 241 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 SPSB2Q99619 263 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 TRIM55Q9BYV6 548 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 SEMA4CQ9C0C4 833 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 ING2Q9H160 280 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 SLC26A1Q9H2B4 701 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 KLHL31Q9H511 634 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 IPPKQ9H8X2 491 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 MKKSQ9NPJ1 570 aaPredicted RBP9.11□□□□□ -0.95
PSMD4-208ENST00000462970 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 C14orf105Q9NVL8 296 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 P4HTMQ9NXG6 502 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 TMEM216Q9P0N5 145 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 FETUBQ9UGM5 382 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 FBXL4Q9UKA2 621 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 MKL2Q9ULH7 1088 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 TMCO1Q9UM00 188 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 MAP4K5Q9Y4K4 846 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 TNPO3Q9Y5L0 923 aaKnown RBP9.11□□□□□ -0.95
PSMD4-208ENST00000462970 DOCK10Q96BY6 2186 aa9.11□□□□□ -0.95
PSMD4-208ENST00000462970 PRRC2CQ9Y520 2896 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CCDC189A1A4V9 331 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 IDSB3KWA1 339 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 H0YIG0 161 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PSMD12O00232 456 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ERI3O43414 337 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CDC123O75794 336 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ONECUT2O95948 504 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 IGHEP01854 428 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 UQCRHP07919 91 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SERPINA6P08185 405 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ACPPP15309 386 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 TSPAN8P19075 237 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 EPORP19235 508 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CD22P20273 847 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 NR1D1P20393 614 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 MMP11P24347 488 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PIK3CGP48736 1102 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CCNG1P51959 295 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PLA2G16P53816 162 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 STXBP1P61764 594 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PCBP2Q15366 365 aaKnown RBP eCLIP9.1□□□□□ -0.956e-11■■■■■ 42
PSMD4-208ENST00000462970 COLEC12Q5KU26 742 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 TTC19Q6DKK2 380 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 MED27Q6P2C8 311 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 RPS27LQ71UM5 84 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PARP9Q8IXQ6 854 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SHISA5Q8N114 240 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CYP4X1Q8N118 509 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 C4orf33Q8N1A6 199 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ARHGEF39Q8N4T4 335 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CLEC1AQ8NC01 280 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 OR51Q1Q8NH59 317 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ACMSDQ8TDX5 336 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 UTP15Q8TED0 518 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CREB3L4Q8TEY5 395 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 METTL21AQ8WXB1 218 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 UBE2E3Q969T4 207 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 C8orf44Q96CB5 159 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 WBP1Q96G27 269 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ABHD17AQ96GS6 310 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 VPS50Q96JG6 964 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 NSUN5Q96P11 429 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 IP6K3Q96PC2 410 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 F2RL3Q96RI0 385 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 MESP1Q9BRJ9 268 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SLC25A23Q9BV35 468 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SARGQ9BW04 601 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 EHD1Q9H4M9 534 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 NOL11Q9H8H0 719 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 COPS7BQ9H9Q2 264 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PPCSQ9HAB8 311 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SEMA4BQ9NPR2 832 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 ZNF490Q9ULM2 529 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 G3BP2Q9UN86 482 aaKnown RBP9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PLAAQ9Y263 795 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 HS3ST3B1Q9Y662 390 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 SLC22A7Q9Y694 548 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 PCSK5Q92824 1860 aa9.1□□□□□ -0.95
PSMD4-208ENST00000462970 CNTRLQ7Z7A1 2325 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 OR2W5A6NFC9 320 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 VSTM2BA6NLU5 285 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 A8MT66 165 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 C4orf51C9J302 202 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 SAP18O00422 153 aaKnown RBP9.09□□□□□ -0.95
PSMD4-208ENST00000462970 COPEO14579 308 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 CHST10O43529 356 aa9.09□□□□□ -0.95
PSMD4-208ENST00000462970 KLK8O60259 260 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms