RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	LPAR4	Q99677	370 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	TSGA10	Q9BZW7	698 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	AICDA	Q9GZX7	198 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	PCBD2	Q9H0N5	130 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	ATG10	Q9H0Y0	220 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	CDCP1	Q9H5V8	836 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	MCCC2	Q9HCC0	563 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	PLSCR2	Q9NRY7	297 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	COMMD10	Q9Y6G5	202 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	TCRBV16S1A1N1	A0A5B0	115 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	CTAGE9	A4FU28	777 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	SAGE2P	A6NJ88	616 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	SMIM10L1	P0DMW3	83 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	ZNF24	P17028	368 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	CAPN3	P20807	821 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	TERF1	P54274	439 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	OR4D2	P58180	307 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	MLF1	P58340	268 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	OLR1	P78380	273 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	MEF2A	Q02078	507 aa	Predicted RBP	10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	DHX9	Q08211	1270 aa	Known RBP	10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	GPS1	Q13098	491 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	SP140	Q13342	867 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	KRTAP21-3	Q3LHN1	58 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	QSOX2	Q6ZRP7	698 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	ZNF662	Q6ZS27	426 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	GSTA5	Q7RTV2	222 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	STRA8	Q7Z7C7	330 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	C17orf64	Q86WR6	236 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	RPS19BP1	Q86WX3	136 aa	Known RBP	10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	APCDD1L	Q8NCL9	501 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	OR56A3	Q8NH54	315 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	NT5C	Q8TCD5	201 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	TBC1D20	Q96BZ9	403 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	SMIM10	Q96HG1	83 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	FAM129A	Q9BZQ8	928 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	PARVB	Q9HBI1	364 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	GPAM	Q9HCL2	828 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	ZNF223	Q9UK11	482 aa	Predicted RBP	10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	FBXO5	Q9UKT4	447 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	CLDN16	Q9Y5I7	305 aa		10.45	□□□□□ -0.74
PTPN7-204	ENST00000462815	MAGEB16	A2A368	324 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	SDR42E2	A6NKP2	422 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	NDC80	O14777	642 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	SLC16A5	O15375	505 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	CHST10	O43529	356 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	MLYCD	O95822	493 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	C8G	P07360	202 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	SLC35G6	P0C7Q6	338 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	ABO	P16442	354 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	ALOX12	P18054	663 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	SCTR	P47872	440 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	VPS41	P49754	854 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	HLCS	P50747	726 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	ITGA8	P53708	1063 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	CDKN2D	P55273	166 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	BTG2	P78543	158 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	OC90	Q02509	493 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	TLE4	Q04727	773 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	NAE1	Q13564	534 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	PWP1	Q13610	501 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	HERC3	Q15034	1050 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	DEFB134	Q4QY38	66 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	CMPK2	Q5EBM0	449 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	EMC4	Q5J8M3	183 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	RBM20	Q5T481	1227 aa	Known RBP	10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	CASC4	Q6P4E1	433 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	PAQR3	Q6TCH7	311 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	CEP97	Q8IW35	865 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	LMNTD2	Q8IXW0	634 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	RPRML	Q8N4K4	120 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	HORMAD2	Q8N7B1	307 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	NAT8L	Q8N9F0	302 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	ANKRD53	Q8N9V6	530 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	C16orf52	Q8NHV5	167 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	FAM57A	Q8TBR7	257 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	UTP15	Q8TED0	518 aa	Known RBP	10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	NDN	Q99608	321 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	SLC6A16	Q9GZN6	736 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	PLAC1	Q9HBJ0	212 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	NECTIN3	Q9NQS3	549 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	IKZF3	Q9UKT9	509 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	PPIE	Q9UNP9	301 aa	Known RBP	10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	HCFC1	P51610	2035 aa		10.44	□□□□□ -0.74
PTPN7-204	ENST00000462815	TRBC2	A0A5B9	178 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	GOLGA8M	H3BSY2	632 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	TGFBR3L	H3BV60	316 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	NDUFS4	O43181	175 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	CEP104	O60308	925 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	KRT14	P02533	472 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	ZNF888	P0CJ79	500 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	MAOA	P21397	527 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	CCND1	P24385	295 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	CXCR5	P32302	372 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	CYB561	P49447	251 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	GPR143	P51810	404 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	PGGT1B	P53609	377 aa		10.43	□□□□□ -0.74
PTPN7-204	ENST00000462815	TAS2R50	P59544	299 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms