RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 FAM60AQ9NP50 221 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 PPANQ9NQ55 473 aaKnown RBP5.5□□□□□ -1.53
VPS36-202ENST00000462289 RRAGDQ9NQL2 400 aaPredicted RBP5.5□□□□□ -1.53
VPS36-202ENST00000462289 SNX15Q9NRS6 342 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 OCIAD1Q9NX40 245 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 MKS1Q9NXB0 559 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 LGALS13Q9UHV8 139 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 PTBP2Q9UKA9 531 aaKnown RBP5.5□□□□□ -1.53
VPS36-202ENST00000462289 SATB2Q9UPW6 733 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 LOXL2Q9Y4K0 774 aa5.5□□□□□ -1.53
VPS36-202ENST00000462289 SPTA1P02549 2419 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 A0A087X1B8 175 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 CCDC151A5D8V7 595 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 ZNF839A8K0R7 811 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 CDC7O00311 574 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TAPBPO15533 448 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PHGDHO43175 533 aaKnown RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 TLX3O43711 291 aaPredicted RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 BRINP1O60477 761 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PRAMEF4O60810 478 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 CTSVO60911 334 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 KERAO60938 352 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 KRT38O76015 456 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 KLHL2O95198 593 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SHBGP04278 402 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SNRPAP09012 282 aaKnown RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 CCDC166P0CW27 439 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 FOLR1P15328 257 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 AMD1P17707 334 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 POLR2CP19387 275 aaPredicted RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 CYP2A7P20853 494 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 CCND1P24385 295 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 HRH2P25021 359 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 GRIA3P42263 894 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 CASP2P42575 452 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SERPINB8P50452 374 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 GABREP78334 506 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 ABATP80404 500 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SLC18A2Q05940 514 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 USP10Q14694 798 aaKnown RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 NAA25Q14CX7 972 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 ACAP2Q15057 778 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TGFBIQ15582 683 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 OR4D1Q15615 310 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TSNQ15631 228 aaKnown RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 PRTGQ2VWP7 1150 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 AMZ1Q400G9 498 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TECRLQ5HYJ1 363 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 PRR31Q5SQ13 230 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 BEND6Q5SZJ8 279 aaPredicted RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 CACHD1Q5VU97 1274 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PRAMEF9Q5VWM5 478 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 GTF2IRD2BQ6EKJ0 949 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 AGTRAPQ6RW13 159 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 LCTLQ6UWM7 567 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 CDHR3Q6ZTQ4 885 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 UBE2R2Q712K3 238 aaPredicted RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 MED25Q71SY5 747 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 GTF2IRD2Q86UP8 949 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PAQR7Q86WK9 346 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 MYO1HQ8N1T3 1032 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 RIBC1Q8N443 379 aaPredicted RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 FBXO39Q8N4B4 442 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 RCBTB1Q8NDN9 531 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 MCOLN3Q8TDD5 553 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 JPH3Q8WXH2 748 aaPredicted RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 FAM136AQ96C01 138 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 ELMO2Q96JJ3 720 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TGM7Q96PF1 710 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 OR2A5Q96R48 311 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TAAR9Q96RI9 348 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TMEM79Q9BSE2 394 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PCBD2Q9H0N5 130 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 EHD1Q9H4M9 534 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 XKR8Q9H6D3 395 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SLC6A20Q9NP91 592 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 INTS7Q9NVH2 962 aaKnown RBP5.49□□□□□ -1.53
VPS36-202ENST00000462289 FOXJ2Q9P0K8 574 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SLC39A10Q9ULF5 831 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SH2B3Q9UQQ2 575 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 ACOT9Q9Y305 439 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 TSC22D4Q9Y3Q8 395 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 B3GALT1Q9Y5Z6 326 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 PIEZO2Q9H5I5 2752 aa5.49□□□□□ -1.53
VPS36-202ENST00000462289 SCN2AQ99250 2005 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 SCN3AQ9NY46 2000 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 CNTRLQ7Z7A1 2325 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 KALRNO60229 2985 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 A0A096LPK6 155 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 EXOC1LA0A1B0GW35 172 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 SLC9B1P1A6NJY1 282 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 TRIM49D1C9J1S8 452 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 MAP2K7O14733 419 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 NRP2O60462 931 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 SRPX2O60687 465 aaPredicted RBP5.48□□□□□ -1.53
VPS36-202ENST00000462289 CDH16O75309 829 aa5.48□□□□□ -1.53
VPS36-202ENST00000462289 KRT37O76014 449 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms