RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 UFM1P61960 85 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 RPS21P63220 83 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 C1orf61Q13536 156 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 LAMB3Q13751 1172 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PDE1CQ14123 709 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 NR1D2Q14995 579 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 C16orf72Q14CZ0 275 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 LACTB2Q53H82 288 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 Q5PR19 223 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 FAM69AQ5T7M9 428 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 FHL5Q5TD97 284 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 C11orf87Q6NUJ2 197 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PMF1Q6P1K2 205 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 MACC1Q6ZN28 852 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 H1FNTQ75WM6 255 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 B4GALNT4Q76KP1 1039 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 TRIM74Q86UV6 250 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 TRIM73Q86UV7 250 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 C17orf82Q86X59 251 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 LGI2Q8N0V4 545 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 CCAR2Q8N163 923 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 TTC39CQ8N584 583 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 ARL10Q8N8L6 244 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 OR6C4Q8NGE1 309 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 ADAMTS15Q8TE58 950 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 DQX1Q8TE96 717 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 SEMA4DQ92854 862 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 EEF2KMTQ96G04 330 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 NR1H4Q96RI1 486 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 PSMB7Q99436 277 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 FEM1AQ9BSK4 669 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 C1QTNF7Q9BXJ2 289 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 CUEDC2Q9H467 287 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 CXorf56Q9H5V9 222 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 AAMDCQ9H7C9 122 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 CISHQ9NSE2 258 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PEMTQ9UBM1 199 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 HEY2Q9UBP5 337 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 APOBEC3BQ9UH17 382 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 TSPAN16Q9UKR8 245 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 TP53TG5Q9Y2B4 290 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 COL6A5A8TX70 2615 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PVALEFA0A1B0GWK0 134 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 A0A1W2PPH5 198 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 PABPN1LA6NDY0 278 aaKnown RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 PDXKO00764 312 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 HSPB6O14558 160 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 SMAD6O43541 496 aaKnown RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 LDLRP01130 860 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 FGF3P11487 239 aaPredicted RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 PCNAP12004 261 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 CCL4P13236 92 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 ADRB3P13945 408 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 PRF1P14222 555 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 ZNF8P17098 575 aaPredicted RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 CD58P19256 250 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 OAS2P29728 719 aaKnown RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 FMO4P31512 558 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 GGT5P36269 586 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 EIF3BP55884 814 aaKnown RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 SLC18A2Q05940 514 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 CDC20Q12834 499 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 SLC39A14Q15043 492 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 GOLGA7BQ2TAP0 167 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 SERTAD4-AS1Q5TG53 156 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 HEPHL1Q6MZM0 1159 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 LCLAT1Q6UWP7 414 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 MAATS1Q7Z4T9 603 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 TAC4Q86UU9 113 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 KIAA0895Q8NCT3 520 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 GOLGA5Q8TBA6 731 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 OTULINQ96BN8 352 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 FEM1CQ96JP0 617 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 BTN2A3PQ96KV6 586 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 HSFY1Q96LI6 401 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 SERPINB11Q96P15 392 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 CMKLR1Q99788 373 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 PANK2Q9BZ23 570 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 EDEM3Q9BZQ6 932 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 KLHL31Q9H511 634 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 MAP6D1Q9H9H5 199 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 BRF2Q9HAW0 419 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 LRRC4Q9HBW1 653 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 SPATS2LQ9NUQ6 558 aaKnown RBP4.69□□□□□ -1.66
COPS3-204ENST00000462236 DONSONQ9NYP3 566 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 PILRAQ9UKJ1 303 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 TRAF3IP3Q9Y228 551 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 COQ4Q9Y3A0 265 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 RAP2CQ9Y3L5 183 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 RNF215Q9Y6U7 377 aa4.69□□□□□ -1.66
COPS3-204ENST00000462236 LOC101059948A0A1B0GTJ6 334 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 IGLON5A6NGN9 336 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 DNAJC9-AS1A6NH13 148 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 CBY3A6NI87 242 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 A6NNC1 897 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 H3BQV1 296 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 K7ERQ8 282 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 KPNA3O00505 521 aaPredicted RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 SOCS2O14508 198 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms