RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TEX9Q8N6V9 391 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZNF740Q8NDX6 193 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 EPS8L3Q8TE67 593 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SMAD5Q99717 465 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 DRC3Q9H069 523 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PRM3Q9NNZ6 103 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MAP10Q9P2G4 905 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 XPR1Q9UBH6 696 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SCN3AQ9NY46 2000 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 A0A1W2PPM1 405 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ANKDD1BA6NHY2 528 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 STX16-NPEPL1H3BU86 382 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 STX16O14662 325 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 P2RX6O15547 441 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NDUFS4O43181 175 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GLRA3O75311 464 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FBLP22087 321 aaKnown RBP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MMP11P24347 488 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 OR1D4P47884 311 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PCDH1Q08174 1060 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 RAPSNQ13702 412 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GTF2H2Q13888 395 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 DOC2AQ14183 400 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLBPQ14493 270 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NAA30Q147X3 362 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MYBPC3Q14896 1274 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 HERC3Q15034 1050 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 JMJD6Q6NYC1 403 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GTF2H2CQ6P1K8 395 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZADH2Q8N4Q0 377 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FAM26EQ8N5C1 309 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PTGR2Q8N8N7 351 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GALNT11Q8NCW6 608 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 OR2W6PQ8NHA6 318 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NT5CQ8TCD5 201 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MZB1Q8WU39 189 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ATP6V1E2Q96A05 226 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PNPLA2Q96AD5 504 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PHF21BQ96EK2 531 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 WDR34Q96EX3 536 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MMABQ96EY8 250 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 C10orf90Q96M02 699 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 YIPF2Q9BWQ6 316 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC29A3Q9BZD2 475 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC26A1Q9H2B4 701 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ANKHQ9HCJ1 492 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SEMA3GQ9NS98 782 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TMEM216Q9P0N5 145 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZNF282Q9UDV7 671 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC22A7Q9Y694 548 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
RAB11FIP3-207ENST00000461009 H0YIG0 161 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NSA2O95478 260 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SERPINA6P08185 405 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ITGA3P26006 1051 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 EEF1DP29692 281 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 HNF4AP41235 474 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 STXBP1P61764 594 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 DSG2Q14126 1118 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 RBBP7Q16576 425 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NKG7Q16617 165 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CCDC153Q494R4 210 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 LIPJQ5W064 366 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TMEM214Q6NUQ4 689 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ABHD13Q7L211 337 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PPP1R32Q7Z5V6 425 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CROCCP2Q86T23 111 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC22A9Q8IVM8 553 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CYP4X1Q8N118 509 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 METTL27Q8N6F8 245 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 KCT2Q8NC54 265 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PPP4R1Q8TF05 950 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CCT6BQ92526 530 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MIEF2Q96C03 454 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CCDC126Q96EE4 140 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MACROD1Q9BQ69 325 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TMEM109Q9BVC6 243 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SPNS1Q9H2V7 528 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SYNPO2LQ9H987 977 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 COPG2Q9UBF2 871 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ADGRE2Q9UHX3 823 aa12.55□□□□□ -0.4
RAB11FIP3-207ENST00000461009 A0A0A6YYC8 382 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 I3L1I5 382 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 COPEO14579 308 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FOXS1O43638 330 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 UGDHO60701 494 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CLEC3AO75596 197 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 WFS1O76024 890 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MED26O95402 600 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 STATHP02808 62 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 UMODP07911 640 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 KRT4P19013 534 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ATP5F1P24539 256 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SERPINB1P30740 379 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CRHR1P34998 444 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms