RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 HEATR5BQ9P2D3 2071 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 C7orf72A4D263 438 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 PRR19A6NJB7 356 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 ACOX3O15254 700 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 H6PDO95479 791 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 HOXB2P14652 356 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 CKMT2P17540 419 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 CTHP32929 405 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 CAPGP40121 348 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 MAGEA8P43361 318 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 RAB28P51157 221 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 NR1H2P55055 460 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 APOFQ13790 326 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 DAG1Q14118 895 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 VMACQ2NL98 169 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 SLC36A3Q495N2 470 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERCC3-205ENST00000460485 BORAQ6PGQ7 559 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 DOK6Q6PKX4 331 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 FAM83HQ6ZRV2 1179 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-205ENST00000460485 HIPK1Q86Z02 1210 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 ZDHHC13Q8IUH4 622 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 SFTPA1Q8IWL2 248 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 OR2L8Q8NGY9 312 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERCC3-205ENST00000460485 PNPT1Q8TCS8 783 aaKnown RBP13.53□□□□□ -0.24
ERCC3-205ENST00000460485 PYURFQ96I23 114 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 SLC29A1Q99808 456 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 RBM4BQ9BQ04 359 aaKnown RBP13.53□□□□□ -0.24
ERCC3-205ENST00000460485 RBM4Q9BWF3 364 aaKnown RBP13.53□□□□□ -0.24
ERCC3-205ENST00000460485 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 IKZF5Q9H5V7 419 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 TMEM98Q9Y2Y6 226 aa13.53□□□□□ -0.24
ERCC3-205ENST00000460485 TPST1O60507 370 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 RNGTTO60942 597 aaKnown RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 LRATO95237 230 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 KRT75O95678 551 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ALBP02768 609 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 PCGF2P35227 344 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 TIE1P35590 1138 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ARSFP54793 590 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ADPRHP54922 357 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 VAC14Q08AM6 782 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 PON2Q15165 354 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 TMEM196Q5HYL7 178 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 EOGTQ5NDL2 527 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 CATSPEREQ5SY80 951 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 TTC23Q5W5X9 447 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 NAIF1Q69YI7 327 aaPredicted RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 FAM71E1Q6IPT2 247 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 PATL1Q86TB9 770 aaKnown RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 TRIM69Q86WT6 500 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 OR7A2PQ8NGA2 310 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 OR4K1Q8NGD4 311 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 OR5AR1Q8NGP9 310 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 OR5K1Q8NHB7 308 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 GANCQ8TET4 914 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 PPCDCQ96CD2 204 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 NRBF2Q96F24 287 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 AURKBQ96GD4 344 aaPredicted RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 INPP5KQ9BT40 448 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 TRIM8Q9BZR9 551 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 GABARAPL1Q9H0R8 117 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 TPT1P8Q9HAU6 139 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 CLK4Q9HAZ1 481 aaKnown RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 NEUROD4Q9HD90 331 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 AASDHPPTQ9NRN7 309 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ZSCAN32Q9NX65 697 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ZFR2Q9UPR6 939 aaKnown RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ICKQ9UPZ9 632 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.52□□□□□ -0.25
ERCC3-205ENST00000460485 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.25
ERCC3-205ENST00000460485 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 ARHGAP10A1A4S6 786 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 C1orf226A1L170 272 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 GNGT2O14610 69 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 EI24O14681 340 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 LAMTOR5O43504 91 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 CLEC3AO75596 197 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 ETHE1O95571 254 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 CST1P01037 141 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 FURINP09958 794 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 SMIM18P0DKX4 95 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 ENGP17813 658 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 PKLRP30613 574 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 GRK3P35626 688 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 NUDT1P36639 197 aa13.51□□□□□ -0.25
ERCC3-205ENST00000460485 TSFMP43897 325 aaKnown RBP13.51□□□□□ -0.25
ERCC3-205ENST00000460485 ARHGDIAP52565 204 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms