RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 SASH3O75995 380 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 ENO1P06733 434 aaKnown RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 AGXTP21549 392 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 SERPINB5P36952 375 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 SERPINB4P48594 390 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 CDH13P55290 713 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 STXBP1P61764 594 aaKnown RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 DCDP81605 110 aaKnown RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 ZNF33BQ06732 778 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 GALNT1Q10472 559 aaPredicted RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 GPS2Q13227 327 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 MPP2Q14168 576 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 PRAMEF17Q5VTA0 474 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 FRMD7Q6ZUT3 714 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 PROSER1Q86XN7 944 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS45-204ENST00000460366 CACNA2D3Q8IZS8 1091 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 AFAP1L2Q8N4X5 818 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 CCNYL1Q8N7R7 359 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 GOLGA6L1Q8N7Z2 621 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 SLC38A9Q8NBW4 561 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 GALNT6Q8NCL4 622 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 OR7G3Q8NG95 312 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 OR52B6Q8NGF0 335 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 OR6Y1Q8NGX8 325 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 KCNE4Q8WWG9 221 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 ARL8AQ96BM9 186 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 CLIP3Q96DZ5 547 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 ATP6V1G3Q96LB4 118 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 C10orf90Q96M02 699 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 EFHD1Q9BUP0 239 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 GATA5Q9BWX5 397 aaPredicted RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 SLC29A3Q9BZD2 475 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 GSTO2Q9H4Y5 243 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 SEMA4BQ9NPR2 832 aaPredicted RBP9.45□□□□□ -0.9
VPS45-204ENST00000460366 LHX9Q9NQ69 397 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 TRPS1Q9UHF7 1281 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 RNF11Q9Y3C5 154 aa9.45□□□□□ -0.9
VPS45-204ENST00000460366 SPEGQ15772 3267 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 URB1O60287 2271 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 ACACAQ13085 2346 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 TMEM120BA0PK00 339 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 LRIT2A6NDA9 550 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 C21orf140B9A014 251 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 H0YIG0 161 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 FOXE1O00358 373 aaPredicted RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 P2RX6O15547 441 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 RRP8O43159 456 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 NDUFS4O43181 175 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 FOXS1O43638 330 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 NPHS1O60500 1241 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 SNUPNO95149 360 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 ESRRBO95718 433 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 RECKO95980 971 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ALBP02768 609 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 RAB40ALP0C0E4 278 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 SMIM10L1P0DMW3 83 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ALAS2P22557 587 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 EIF2S3P41091 472 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 STAT5AP42229 794 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ARFIP1P53367 373 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 SKP1P63208 163 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 PHEXP78562 749 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 HYAL2Q12891 473 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 CLN3Q13286 438 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 HERC3Q15034 1050 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 RBBP7Q16576 425 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 CPSF6Q16630 551 aaKnown RBP eCLIP9.44□□□□□ -0.9
VPS45-204ENST00000460366 HKDC1Q2TB90 917 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ADPRMQ3LIE5 342 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 NKAIN1Q4KMZ8 207 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 TMEM35AQ53FP2 167 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 LETMD1Q6P1Q0 360 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 GPRIN3Q6ZVF9 776 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 TTLL10Q6ZVT0 673 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ABHD13Q7L211 337 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 NUDCD3Q8IVD9 361 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 SRFBP1Q8NEF9 429 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 OR4F6Q8NGB9 312 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 TRPC4APQ8TEL6 797 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ZNF473Q8WTR7 871 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 ZCCHC14Q8WYQ9 949 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 SMIM10Q96HG1 83 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 GPR87Q9BY21 358 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 STARD5Q9NSY2 213 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 ZNF446Q9NWS9 450 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 NKIRAS1Q9NYS0 192 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 DHCR7Q9UBM7 475 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 SNX6Q9UNH7 406 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 MDC1Q14676 2089 aaKnown RBP9.44□□□□□ -0.9
VPS45-204ENST00000460366 APC2O95996 2303 aa9.44□□□□□ -0.9
VPS45-204ENST00000460366 A0A087WV48 116 aa9.43□□□□□ -0.9
VPS45-204ENST00000460366 TAF4O00268 1085 aa9.43□□□□□ -0.9
VPS45-204ENST00000460366 PPP6CO00743 305 aa9.43□□□□□ -0.9
VPS45-204ENST00000460366 MED26O95402 600 aa9.43□□□□□ -0.9
VPS45-204ENST00000460366 NSA2O95478 260 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms