RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 DESI1Q6ICB0 168 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 SYTL1Q8IYJ3 562 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 OR52J3Q8NH60 311 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 C9orf43Q8TAL5 461 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 UTP15Q8TED0 518 aaKnown RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 ASZ1Q8WWH4 475 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 HOXD1Q9GZZ0 328 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 ZNF334Q9HCZ1 680 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 GPATCH2Q9NW75 528 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CD84Q9UIB8 345 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 LSM7Q9UK45 103 aaKnown RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 MKLN1Q9UL63 735 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 IFT52Q9Y366 437 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 A0A1W2PQ45 241 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 A0A1W2PQY0 241 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 MGAT4DA6NG13 374 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 ARHGEF33A8MVX0 844 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 BNIP3LO60238 219 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 MTX2O75431 263 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 TNFRSF21O75509 655 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 SLCO2B1O94956 709 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 SNX4O95219 450 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CRATP43155 626 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CTSOP43234 321 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CARTPTQ16568 116 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 MPPE1Q53F39 396 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 SPIN4Q56A73 249 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 ZNF367Q7RTV3 350 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CPXM2Q8N436 756 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 GOT1L1Q8NHS2 421 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-204ENST00000456013 ATL1Q8WXF7 558 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CHCHD6Q9BRQ6 235 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 CCM2Q9BSQ5 444 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 STARD7Q9NQZ5 370 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 SH3BP4Q9P0V3 963 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 B4GALT6Q9UBX8 382 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 PCDHGB6Q9Y5F9 930 aa17.01■□□□□ 0.31
PTPN6-204ENST00000456013 PNMA8CA0A1B0GUJ8 204 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 SGTAO43765 313 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 DYRK3O43781 588 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 PSIP1O75475 530 aaKnown RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 ETFAP13804 333 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 ITGA2P17301 1181 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 ALOX12P18054 663 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 OR1E2P47887 323 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 CAP1Q01518 475 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 RBBP4Q09028 425 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 NAE1Q13564 534 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 EEF1AKMT2Q5JPI9 291 aaKnown RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 COX20Q5RI15 118 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 AGTRAPQ6RW13 159 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 NLRP8Q86W28 1048 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 HEATR4Q86WZ0 1026 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 KLHDC8AQ8IYD2 350 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 CXorf40BQ96DE9 158 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 CPEB1Q9BZB8 566 aaKnown RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 BHLHE41Q9C0J9 482 aaPredicted RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 IMPAD1Q9NX62 359 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 DUSP12Q9UNI6 340 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 ZNF232Q9UNY5 417 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 RBMX2Q9Y388 322 aaKnown RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 PRAMEF25A6NGN4 478 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 TIA1P31483 386 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN6-204ENST00000456013 CRISP3P54108 245 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 ZNF385BQ569K4 471 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 ADNP2Q6IQ32 1131 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 C22orf39Q6P5X5 142 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 IGSF21Q96ID5 467 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 Q96MT0 163 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 OR4K3Q96R72 315 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 YME1L1Q96TA2 773 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 MS4A12Q9NXJ0 267 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 STOX2Q9P2F5 926 aaPredicted RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 KLHL3Q9UH77 587 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 ATP6V1HQ9UI12 483 aa17■□□□□ 0.31
PTPN6-204ENST00000456013 EXO1Q9UQ84 846 aaKnown RBP17■□□□□ 0.31
PTPN6-204ENST00000456013 PCM1Q15154 2024 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 CXorf51AA0A1B0GTR3 108 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 PRRG1O14668 218 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 SH3BGRLO75368 114 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 AP2A2O94973 939 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 SOX6P35712 828 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 CASP3P42574 277 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 SCARB2Q14108 478 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 GCNT6Q5T4J0 391 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 C19orf48Q6RUI8 117 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 ANGPTL8Q6UXH0 198 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 CCBE1Q6UXH8 406 aaPredicted RBP16.99■□□□□ 0.31
PTPN6-204ENST00000456013 ZNF852Q6ZMS4 543 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 CCDC80Q76M96 950 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 BBS7Q8IWZ6 715 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 B3GNT7Q8NFL0 401 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 OR7G3Q8NG95 312 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 OR52N2Q8NGI0 321 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 MED8Q96G25 268 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 TSEN34Q9BSV6 310 aaKnown RBP16.99■□□□□ 0.31
PTPN6-204ENST00000456013 CDCA4Q9BXL8 241 aa16.99■□□□□ 0.31
PTPN6-204ENST00000456013 ZDHHC6Q9H6R6 413 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms