RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PDZD2O15018 2839 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 USP27XA6NNY8 438 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 KLRC4-KLRK1H3BQV0 150 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TFECO14948 347 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 PRMT3O60678 531 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 RDH16O75452 317 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 NEURL1O76050 574 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 FGGP02679 453 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 FHP07954 510 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 HLCSP50747 726 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 EFNA3P52797 238 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 RGS1Q08116 209 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 CUL1Q13616 776 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 SIX1Q15475 284 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 KRTAP21-3Q3LHN1 58 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 PAOXQ6QHF9 649 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 LCTLQ6UWM7 567 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 CYHR1Q6ZMK1 362 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 MEX3BQ6ZN04 569 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 QSOX2Q6ZRP7 698 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 PRSS41Q7RTY9 318 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 DOLPP1Q86YN1 238 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TMEM139Q8IV31 216 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 MYO1HQ8N1T3 1032 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 AFAP1L2Q8N4X5 818 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 ACBD4Q8NC06 268 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 MCUQ8NE86 351 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 ABHD11Q8NFV4 315 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 GIMAP7Q8NHV1 300 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 ZCCHC10Q8TBK6 192 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 CD200R1Q8TD46 325 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 ELP5Q8TE02 316 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 ATL1Q8WXF7 558 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 ZNF669Q96BR6 464 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 SDCCAG3Q96C92 435 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 PEX11GQ96HA9 241 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 DMRTA2Q96SC8 542 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 GPR21Q99679 349 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 SARGQ9BW04 601 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TRIM54Q9BYV2 358 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 CDCP1Q9H5V8 836 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 LANCL2Q9NS86 450 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TAS2R13Q9NYV9 303 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 GALPQ9UBC7 116 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 MAD1L1Q9Y6D9 718 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 FBN2P35556 2912 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 CSMD1Q96PZ7 3565 aa7.53□□□□□ -1.2
NIF3L1-209ENST00000454952 TRBC2A0A5B9 178 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 SAGE2PA6NJ88 616 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 C19orf84I3L1E1 186 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 PSMD12O00232 456 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 NDUFS4O43181 175 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 GALR3O60755 368 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CDC123O75794 336 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 STATHP02808 62 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CDH1P12830 882 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 ALOX12P18054 663 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 TPP2P29144 1249 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CHRNB4P30926 498 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 PTGS2P35354 604 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 AHRP35869 848 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 SLC1A2P43004 574 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 KIR3DL1P43629 444 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 AP1S2P56377 157 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 MLF1P58340 268 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 GPS1Q13098 491 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CTBP1Q13363 440 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 NAE1Q13564 534 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 TERF2Q15554 542 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 TESK1Q15569 626 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 BBS9Q3SYG4 887 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 ARHGAP11AQ6P4F7 1023 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 AGTRAPQ6RW13 159 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 PIWIL4Q7Z3Z4 852 aaKnown RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 SLC26A11Q86WA9 606 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 PDSS2Q86YH6 399 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 DENND6AQ8IWF6 608 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 GPALPP1Q8IXQ4 340 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CPNE9Q8IYJ1 553 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CYP4X1Q8N118 509 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 ARMC10Q8N2F6 343 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 KCT2Q8NC54 265 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 FAM57AQ8TBR7 257 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 CDK15Q96Q40 435 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 SLC30A3Q99726 388 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 NPAS2Q99743 824 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 TREX2Q9BQ50 279 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 AARSD1Q9BTE6 412 aaKnown RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 SGPP1Q9BX95 441 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 HES7Q9BYE0 225 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 DEFB126Q9BYW3 111 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 TP63Q9H3D4 680 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 FBXO6Q9NRD1 293 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 C20orf96Q9NUD7 363 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 FBXO5Q9UKT4 447 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 MED16Q9Y2X0 877 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 HCFC1P51610 2035 aa7.52□□□□□ -1.21
NIF3L1-209ENST00000454952 PHF3Q92576 2039 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms