RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 OR5P2Q8WZ92 322 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 SNX19Q92543 992 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 TBC1D20Q96BZ9 403 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 PPCDCQ96CD2 204 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 CPPED1Q9BRF8 314 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 NLNQ9BYT8 704 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 Q9H521 79 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 KAT8Q9H7Z6 458 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 PRDM8Q9NQV8 689 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 ZNF624Q9P2J8 865 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 THEGQ9P2T0 379 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 CPNE7Q9UBL6 633 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 EPHA6Q9UF33 1036 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 GIMAP2Q9UG22 337 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 SIT1Q9Y3P8 196 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 PRKAB1Q9Y478 270 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 ELOVL7A1L3X0 281 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 TLR4O00206 839 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 NDUFS4O43181 175 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 ANXA6P08133 673 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 RPL10P27635 214 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 PTPN6P29350 595 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 CNR2P34972 360 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 BSGP35613 385 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC19A1P41440 591 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 CLDN2P57739 230 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 BIKQ13323 160 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 RBBP5Q15291 538 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 SF1Q15637 639 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 OGFRL1Q5TC84 451 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 OR4C11Q6IEV9 310 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 BHLHB9Q6PI77 547 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 WDR5BQ86VZ2 330 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 OOSP2Q86WS3 158 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 CACUL1Q86Y37 369 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 SIX5Q8N196 739 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 OR2T12Q8NG77 320 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 ADAMTS18Q8TE60 1221 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 MTFMTQ96DP5 389 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 TM4SF19Q96DZ7 209 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 NSMCE2Q96MF7 247 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 NPLQ9BXD5 320 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 KLHL4Q9C0H6 718 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 FZD3Q9NPG1 666 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 PHF11Q9UIL8 331 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 PCDHGA4Q9Y5G9 962 aa6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 TP53BP1Q12888 1972 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-210ENST00000454859 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 A0A0J9YY10 115 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DHRS12A0PJE2 317 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 LRIT2A6NDA9 550 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 LMO7DNF2Z398 122 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 H3BNX3 289 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 OR1F1O43749 312 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MAPK12P53778 367 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MAPK10P53779 464 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MS4A2Q01362 244 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 GAS6Q14393 721 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MYBPC3Q14896 1274 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ZC3H12BQ5HYM0 836 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 CCNYL2Q5T2Q4 361 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 IER5LQ5T953 404 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 INTS11Q5TA45 600 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TRIM40Q6P9F5 258 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC2A7Q6PXP3 512 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TMEM64Q6YI46 380 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TMEM26Q6ZUK4 368 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 GPR155Q7Z3F1 870 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 VN1R5Q7Z5H4 357 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SPATA24Q86W54 205 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 APLFQ8IW19 511 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MICU2Q8IYU8 434 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC22A18ASQ8N1D0 253 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ANKFN1Q8N957 763 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 FAM47BQ8NA70 645 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 C1orf216Q8TAB5 229 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SFXN5Q8TD22 340 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 FKBP10Q96AY3 582 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 CCDC124Q96CT7 223 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ZBED6CLQ96FA7 236 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ZNF583Q96ND8 569 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TSSK3Q96PN8 268 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PANX1Q96RD7 426 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ZNF184Q99676 751 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DPYSL5Q9BPU6 564 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 REXO4Q9GZR2 422 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TMEM168Q9H0V1 697 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PRMT8Q9NR22 394 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 NKX1-2Q9UD57 310 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ANAPC2Q9UJX6 822 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 RPS6KA6Q9UK32 745 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PSME2Q9UL46 239 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SAMD4AQ9UPU9 718 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 INVSQ9Y283 1065 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 LRCH1Q9Y2L9 728 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms