RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FOXK1P85037 733 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 PCLAFQ15004 111 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 FAM214AQ32MH5 1076 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 CAPN13Q6MZZ7 669 aaPredicted RBP16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 MBOAT1Q6ZNC8 495 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 RNF44Q7L0R7 432 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 PPP1R32Q7Z5V6 425 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 C10orf107Q8IVU9 208 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 ZFYVE21Q9BQ24 234 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 MFRPQ9BY79 579 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 CD244Q9BZW8 370 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 PCBD2Q9H0N5 130 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 SOX17Q9H6I2 414 aaPredicted RBP16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 SYNPO2LQ9H987 977 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 OXSMQ9NWU1 459 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 P4HTMQ9NXG6 502 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 ANGPTL3Q9Y5C1 460 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 KLK4Q9Y5K2 254 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 NBASA2RRP1 2371 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 IGKV1-8A0A0C4DH67 115 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 E7ENX8 843 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 H0YGG7 62 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 CCNT2O60583 730 aaKnown RBP16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 PIM1P11309 404 aaPredicted RBP16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 DRD4P21917 467 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 PIK3CGP48736 1102 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 HSPA7P48741 367 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 ARF3P61204 181 aaPredicted RBP16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 TAP2Q03519 686 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 PRDX1Q06830 199 aaKnown RBP16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 NAE1Q13564 534 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 PCBP2Q15366 365 aaKnown RBP eCLIP16.21■□□□□ 0.192e-13■■■■■ 46.3
PRPF40A-204ENST00000450303 NKG7Q16617 165 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 CFAP157Q5JU67 520 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 THEMIS2Q5TEJ8 643 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 YOD1Q5VVQ6 348 aaPredicted RBP16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 ICE2Q659A1 982 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 LRRC70Q7Z2Q7 622 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 PAQR7Q86WK9 346 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 OR56A3Q8NH54 315 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 UBTD2Q8WUN7 234 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 PLCD4Q9BRC7 762 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 ATG10Q9H0Y0 220 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 CCDC177Q9NQR7 707 aaPredicted RBP16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 GPR83Q9NYM4 423 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 LUZP4Q9P127 313 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 OPTCQ9UBM4 332 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 CTSFQ9UBX1 484 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 ZNF451Q9Y4E5 1061 aa16.21■□□□□ 0.19
PRPF40A-204ENST00000450303 WDR91A4D1P6 747 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 K7EPI3 171 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 TAPBPO15533 448 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 ALOX12BO75342 701 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 WDR47O94967 919 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 EEF1DP29692 281 aaKnown RBP16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 WDR4P57081 412 aaKnown RBP16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 HERVK_113P63132 956 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 DCAF10Q5QP82 559 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 ADCK2Q7Z695 626 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 PLD3Q8IV08 490 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 KLHDC8AQ8IYD2 350 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 LRRC56Q8IYG6 542 aaPredicted RBP16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 PRSS58Q8IYP2 241 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 CCDC197Q8NCU1 140 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 COL26A1Q96A83 441 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 FKBP10Q96AY3 582 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 L3HYPDHQ96EM0 354 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 FER1L6-AS2Q96M78 137 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 IP6K3Q96PC2 410 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 HAUS8Q9BT25 410 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 ERVK-6Q9BXR3 956 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF304Q9HCX3 659 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 CUEDC1Q9NWM3 386 aaPredicted RBP16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 G3BP2Q9UN86 482 aaKnown RBP16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 DYRK1BQ9Y463 629 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 NUP210LQ5VU65 1888 aa16.2■□□□□ 0.18
PRPF40A-204ENST00000450303 TTLL8A6PVC2 850 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 SUPT7LO94864 414 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 CCNDBP1O95273 360 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ONECUT2O95948 504 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ALBP02768 609 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 STATHP02808 62 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 GRK2P25098 689 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 SLC6A12P48065 614 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 NAA25Q14CX7 972 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 HKDC1Q2TB90 917 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF678Q5SXM1 525 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ATG16L1Q676U5 607 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF425Q6IV72 752 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 LCTLQ6UWM7 567 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 CCDC121Q6ZUS5 278 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 YTHDF3Q7Z739 585 aaKnown RBP16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 THOC6Q86W42 341 aaKnown RBP16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 CCNYL1Q8N7R7 359 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 SNX31Q8N9S9 440 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 CLEC1AQ8NC01 280 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 RAB3IL1Q8TBN0 382 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 C10orf90Q96M02 699 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 SPSB2Q99619 263 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 TMEM79Q9BSE2 394 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms