RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GSK3BP49841 420 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CPT1AP50416 773 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CLCN3P51790 818 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CACNB3P54284 484 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SPCS3P61009 180 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 E2F1Q01094 437 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CREB5Q02930 508 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SRSF11Q05519 484 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 GRIN2CQ14957 1233 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SF1Q15637 639 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 MINDY4Q4G0A6 757 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 BCL7AQ4VC05 210 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SAPCD1Q5SSQ6 148 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DNLZQ5SXM8 178 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ARHGAP40Q5TG30 622 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TDRD10Q5VZ19 366 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 DPY19L2P1Q6NXN4 242 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DCLRE1AQ6PJP8 1040 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RANBP10Q6VN20 620 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ABHD13Q7L211 337 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 C14orf80Q86SX3 495 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NLRP8Q86W28 1048 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF280BQ86YH2 543 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SPATA2LQ8IUW3 424 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC41A1Q8IVJ1 513 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC38A6Q8IZM9 456 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LIX1Q8N485 282 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FBXL6Q8N531 539 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM185AQ8NFB2 350 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR10G2Q8NGC3 310 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SKA2Q8WVK7 121 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 RSC1A1Q92681 617 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PGAP3Q96FM1 320 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CAMK1GQ96NX5 476 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NELL2Q99435 816 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC38A3Q99624 504 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CDCA7Q9BWT1 371 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 LGR4Q9BXB1 951 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TEX101Q9BY14 249 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 POTEKPQ9BYX7 375 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ADAM33Q9BZ11 813 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR52A5Q9H2C5 316 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CERS4Q9HA82 394 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ASF1BQ9NVP2 202 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DZANK1Q9NVP4 752 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 C14orf119Q9NWQ9 140 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MRPL22Q9NWU5 206 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 COMMD3Q9UBI1 195 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF282Q9UDV7 671 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 FEM1BQ9UK73 627 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 WNK3Q9BYP7 1800 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 C17orf113A0A1B0GUU1 675 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 LOC390937A0A1W2PQ73 354 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 A0A1W2PRB8 838 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NKRFO15226 690 aaKnown RBP eCLIP2.13□□□□□ -2.07
USP53-202ENST00000450251 NUPL2O15504 423 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 GPRIN2O60269 458 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PTP4A3O75365 173 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SEC22BO75396 215 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MT-ND5P03915 603 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IFNA6P05013 189 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PIPP12273 146 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 COX7A2P14406 83 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SPI1P17947 270 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GGT1P19440 569 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CAPN3P20807 821 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PTPN6P29350 595 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CDK8P49336 464 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KCNQ1P51787 676 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SMSP52788 366 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TAS2R19P59542 299 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 POLR2GP62487 172 aaKnown RBP eCLIP2.13□□□□□ -2.07
USP53-202ENST00000450251 ACTC1P68032 377 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ACTA1P68133 377 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TLE3Q04726 772 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ABHD18Q0P651 414 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MLLT11Q13015 90 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 GAS6Q14393 721 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TOMM34Q15785 309 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 CBWD6Q4V339 395 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ARL13AQ5H913 290 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 NHSL2Q5HYW2 709 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CBWD3Q5JTY5 395 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CBWD5Q5RIA9 395 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 STEAP4Q687X5 459 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TANGO2Q6ICL3 276 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR10K2Q6IF99 312 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IL27RAQ6UWB1 636 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GCNT7Q6ZNI0 430 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TMEM179Q6ZVK1 233 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GALNT5Q7Z7M9 940 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZBTB46Q86UZ6 589 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TPRA1Q86W33 373 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MARCH9Q86YJ5 346 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GPSM1Q86YR5 675 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RDH10Q8IZV5 341 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SYNPOQ8N3V7 929 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TRAM1L1Q8N609 369 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms