RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 PCDHGA6Q9Y5G7 932 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 LYVE1Q9Y5Y7 322 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 PRRC2BQ5JSZ5 2229 aaKnown RBP16.26■□□□□ 0.19
TOM1-210ENST00000449058 TTC36A6NLP5 189 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 CLDN25C9JDP6 229 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 ZNF197O14709 1029 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 SPINT1O43278 529 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 TIMP1P01033 207 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 C1GALT1C1LP0DN25 315 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 CSNK2BP67870 215 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 KCNC4Q03721 635 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 SLBPQ14493 270 aaKnown RBP eCLIP16.26■□□□□ 0.19
TOM1-210ENST00000449058 ZNF846Q147U1 533 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 SYTL1Q8IYJ3 562 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 ZNF366Q8N895 744 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 OR4K1Q8NGD4 311 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 ZSWIM3Q96MP5 696 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 WRAP53Q9BUR4 548 aaKnown RBP16.26■□□□□ 0.19
TOM1-210ENST00000449058 EHD1Q9H4M9 534 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 RUBCNLQ9H714 662 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 AKIP1Q9NQ31 210 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 DMRT3Q9NQL9 472 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 RASSF1Q9NS23 344 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 KLHL18O94889 574 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 FADS2O95864 444 aaKnown RBP16.26■□□□□ 0.19
TOM1-210ENST00000449058 FURINP09958 794 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 CISD3P0C7P0 127 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 OCM2P0CE71 109 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 OCMP0CE72 109 aaPredicted RBP16.26■□□□□ 0.19
TOM1-210ENST00000449058 ETFAP13804 333 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 WEE1P30291 646 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 CRATP43155 626 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 ST13P50502 369 aaKnown RBP16.26■□□□□ 0.19
TOM1-210ENST00000449058 PHEXP78562 749 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 OCA2Q04671 838 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 ELOAQ14241 798 aaKnown RBP16.26■□□□□ 0.19
TOM1-210ENST00000449058 CCDC81Q6ZN84 652 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 SLCO6A1Q86UG4 719 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 NDNFQ8TB73 568 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 TMEM184CQ9NVA4 438 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 ATAD3AQ9NVI7 634 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 PCDH10Q9P2E7 1040 aa16.26■□□□□ 0.19
TOM1-210ENST00000449058 PIPSLA2A3N6 862 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 ADAMDEC1O15204 470 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 PSMB9P28065 219 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 IRS1P35568 1242 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 VEGFBP49765 207 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 FCHO2Q0JRZ9 810 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 LRRC56Q8IYG6 542 aaPredicted RBP16.25■□□□□ 0.19
TOM1-210ENST00000449058 CFAP206Q8IYR0 622 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 OR52N2Q8NGI0 321 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 SLC35A5Q9BS91 424 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 DYRK1BQ9Y463 629 aa16.25■□□□□ 0.19
TOM1-210ENST00000449058 OR2A25A4D2G3 310 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 GPR37L1O60883 481 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 C6orf47O95873 294 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 HLA-EP13747 358 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 HTRA4P83105 476 aaPredicted RBP16.24■□□□□ 0.19
TOM1-210ENST00000449058 RBBP4Q09028 425 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 MPEG1Q2M385 716 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 RGS21Q2M5E4 152 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 PAGE2BQ5JRK9 111 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 GCNT6Q5T4J0 391 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 CCDC80Q76M96 950 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 MRPL43Q8N983 215 aaKnown RBP16.24■□□□□ 0.19
TOM1-210ENST00000449058 OR4C15Q8NGM1 316 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 OR9A1PQ8NGU1 263 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 WDR48Q8TAF3 677 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 SPPL2AQ8TCT8 520 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 DYNC2LI1Q8TCX1 351 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 DNASE1L2Q92874 299 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TRIM43Q96BQ3 446 aaPredicted RBP16.24■□□□□ 0.19
TOM1-210ENST00000449058 FEVQ99581 238 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TMEM38AQ9H6F2 299 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 HMG20AQ9NP66 347 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 MYNNQ9NPC7 610 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 RNF6Q9Y252 685 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 COQ6Q9Y2Z9 468 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TESMINQ9Y4I5 508 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 KIF26AQ9ULI4 1882 aaPredicted RBP16.24■□□□□ 0.19
TOM1-210ENST00000449058 M0R3G1 203 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TNFRSF11BO00300 401 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 FUCA1P04066 466 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 GGT2P36268 569 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 RPL3P39023 403 aaKnown RBP16.24■□□□□ 0.19
TOM1-210ENST00000449058 CCR3P51677 355 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 NTHL1P78549 312 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 MC1RQ01726 317 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 EEF1A2Q05639 463 aaKnown RBP16.24■□□□□ 0.19
TOM1-210ENST00000449058 ITGADQ13349 1161 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 PRSS36Q5K4E3 855 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 UBE2UQ5VVX9 321 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 FAM71E1Q6IPT2 247 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 AHSA2Q719I0 299 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TRIM74Q86UV6 250 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TMCO5AQ8N6Q1 288 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 C16orf78Q8WTQ4 265 aa16.24■□□□□ 0.19
TOM1-210ENST00000449058 TAMM41Q96BW9 452 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms