RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 XKR6Q5GH73 641 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 TECRLQ5HYJ1 363 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 ATG9BQ674R7 924 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP39-206ENST00000448971 ARHGEF39Q8N4T4 335 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 STT3BQ8TCJ2 826 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 UBTD2Q8WUN7 234 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP39-206ENST00000448971 MTBPQ96DY7 904 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 IP6K3Q96PC2 410 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 CCDC77Q9BR77 488 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 SARGQ9BW04 601 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 ING2Q9H160 280 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 HCN3Q9P1Z3 774 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP39-206ENST00000448971 PTBP2Q9UKA9 531 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 ASB1Q9Y576 335 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 ANGPTL3Q9Y5C1 460 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 PCDHGA9Q9Y5G4 932 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 V9GYY5 206 aaPredicted RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 PCM1Q15154 2024 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 ANKRD12Q6UB98 2062 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 H0YIG0 161 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 K7EPI3 171 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 RDH16O75452 317 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 ZGLP1P0C6A0 271 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 GCAP28676 217 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 AHRP35869 848 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 AGTR2P50052 363 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 VSNL1P62760 191 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 SKP1P63208 163 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 IRF8Q02556 426 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 KLC1Q07866 573 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 SETDB1Q15047 1291 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 VWA2Q5GFL6 755 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 MFSD4BQ5TF39 518 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 ADGRD1Q6QNK2 874 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 SLCO4C1Q6ZQN7 724 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 ABHD13Q7L211 337 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 PRSS41Q7RTY9 318 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 PPP1R32Q7Z5V6 425 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 TMEM151BQ8IW70 566 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 PLD6Q8N2A8 252 aaKnown RBP13.8□□□□□ -0.2
USP39-206ENST00000448971 AMER3Q8N944 861 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 TMEM102Q8N9M5 508 aaPredicted RBP13.8□□□□□ -0.2
USP39-206ENST00000448971 ANKRD53Q8N9V6 530 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 TRPV3Q8NET8 790 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 TTLQ8NG68 377 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 TM4SF19Q96DZ7 209 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 MOCOSQ96EN8 888 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 PTCD3Q96EY7 689 aaKnown RBP13.8□□□□□ -0.2
USP39-206ENST00000448971 EFCAB11Q9BUY7 163 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 EPB41L4BQ9H329 900 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 MKKSQ9NPJ1 570 aaPredicted RBP13.8□□□□□ -0.2
USP39-206ENST00000448971 SEMA3GQ9NS98 782 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 ZNF358Q9NW07 568 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 TBK1Q9UHD2 729 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 G3BP2Q9UN86 482 aaKnown RBP13.8□□□□□ -0.2
USP39-206ENST00000448971 POLEQ07864 2286 aa13.8□□□□□ -0.2
USP39-206ENST00000448971 HEATR5BQ9P2D3 2071 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 URADA6NGE7 173 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 ZNF860A6NHJ4 632 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 VSTM2BA6NLU5 285 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 SGK494L7N484 410 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 KLHL18O94889 574 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 IGHEP01854 428 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 RBP1P09455 135 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 ZNF888P0CJ79 500 aaPredicted RBP13.79□□□□□ -0.2
USP39-206ENST00000448971 MTHFD2P13995 350 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 MMP11P24347 488 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 ARL1P40616 181 aaPredicted RBP13.79□□□□□ -0.2
USP39-206ENST00000448971 HNF4AP41235 474 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 ALDH18A1P54886 795 aaKnown RBP13.79□□□□□ -0.2
USP39-206ENST00000448971 SNRPNP63162 240 aaKnown RBP13.79□□□□□ -0.2
USP39-206ENST00000448971 CHIT1Q13231 466 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 HERC3Q15034 1050 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 DEFB134Q4QY38 66 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 PAGE2BQ5JRK9 111 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 TOR1AIP1Q5JTV8 583 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 TMIGD1Q6UXZ0 262 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 MED25Q71SY5 747 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 MYLK4Q86YV6 388 aaPredicted RBP13.79□□□□□ -0.2
USP39-206ENST00000448971 CLEC1AQ8NC01 280 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 NT5CQ8TCD5 201 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 VPS50Q96JG6 964 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 FER1L6-AS2Q96M78 137 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 GPR78Q96P69 363 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 SLC25A23Q9BV35 468 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 EHD1Q9H4M9 534 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 P4HTMQ9NXG6 502 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 C3orf18Q9UK00 162 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 NAALAD2Q9Y3Q0 740 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 SLC22A7Q9Y694 548 aa13.79□□□□□ -0.2
USP39-206ENST00000448971 MDC1Q14676 2089 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms