RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SGPP2Q8IWX5 399 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 ST7LQ8TDW4 575 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 NTAN1Q96AB6 310 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 RNF170Q96K19 258 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 MROQ9BYG7 248 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 B3GNT2Q9NY97 397 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 CACNA1BQ00975 2339 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 CLASP1Q7Z460 1538 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 LAMC1P11047 1609 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 CYTIPO60759 359 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 RPP14O95059 124 aaKnown RBP8.69□□□□□ -1.02
NIPBL-202ENST00000448238 AMHP03971 560 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 SCGB1C2P0DMR2 95 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 METTL11BQ5VVY1 283 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 TLDC1Q6P9B6 456 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 MOXD1Q6UVY6 613 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 CLNKQ7Z7G1 428 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 FAM217AQ8IXS0 508 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF416Q9BWM5 594 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 CDH20Q9HBT6 801 aa8.69□□□□□ -1.02
NIPBL-202ENST00000448238 EME2A4GXA9 379 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 DFFBO76075 338 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 C8GP07360 202 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 DLDP09622 509 aaKnown RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 AGXTP21549 392 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 MCAMP43121 646 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 HSPB3Q12988 150 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PPA1Q15181 289 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 LRRC38Q5VT99 294 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 HACD2Q6Y1H2 254 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FAM109AQ8N4B1 249 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FAM46DQ8NEK8 389 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FLRT1Q9NZU1 646 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 RUSC2Q8N2Y8 1516 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF407Q9C0G0 2248 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 KCNK2O95069 426 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 NFYBP25208 207 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 CCNFP41002 786 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 RELL2Q8NC24 303 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 JPH3Q8WXH2 748 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PCED1AQ9H1Q7 454 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ACSS3Q9H6R3 686 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TDRD3Q9H7E2 651 aaKnown RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FBXO5Q9UKT4 447 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 DLGAP4Q9Y2H0 992 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FAM96BQ9Y3D0 163 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PCNX2A6NKB5 2137 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PEX12O00623 359 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TO15178 435 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ADAP00813 363 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 POU2F1P14859 743 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 C1QTNF8P60827 252 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ERVK-8P63133 956 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TMEM53Q6P2H8 277 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 KLHDC1Q8N7A1 406 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OR5H2Q8NGV7 314 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 NEIL3Q8TAT5 605 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 GOLT1BQ9Y3E0 138 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PNPLA7Q6ZV29 1317 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 RPS10-NUDT3A0A1W2PQS6 291 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 SIGLEC16A6NMB1 481 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TLR4O00206 839 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 CD34P28906 385 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 SLC1A3P43003 542 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 RPS10P46783 165 aaKnown RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 POU4F2Q12837 409 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF423Q2M1K9 1284 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 CAMKVQ8NCB2 501 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OR6N1Q8NGY5 312 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TWIST2Q8WVJ9 160 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 SLC38A3Q99624 504 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PDCD1LG2Q9BQ51 273 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 A0A096LPI6 279 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 CCNOP22674 350 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 KDELR1P24390 212 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 MSX1P28360 303 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ICAM3P32942 547 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 KLK7P49862 253 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 CLRN1P58418 232 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 HERVK_113P63132 956 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 LCP2Q13094 533 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 KLHDC10Q6PID8 442 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 GALNT13Q8IUC8 556 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 MYO19Q96H55 970 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 AGAP4Q96P64 663 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ERVK-6Q9BXR3 956 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OR52A5Q9H2C5 316 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OSGEPQ9NPF4 335 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 REV1Q9UBZ9 1251 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 POU2F3Q9UKI9 436 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ATP10AO60312 1499 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OR5H8P0DN80 308 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms