RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 LRRC28Q86X40 367 aaPredicted RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 TRIM48Q8IWZ4 208 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 DDX1Q92499 740 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 CNOT9Q92600 299 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 GTF3AQ92664 365 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 MYO19Q96H55 970 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 GPR137Q96N19 417 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ASB16Q96NS5 453 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 PCYT2Q99447 389 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ZNF670Q9BS34 389 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ZNF2Q9BSG1 426 aaPredicted RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 MRPL4Q9BYD3 311 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 DPH1Q9BZG8 443 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 GORASP2Q9H8Y8 452 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ACSS2Q9NR19 701 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 PPIEQ9UNP9 301 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 NOD1Q9Y239 953 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 SHROOM3Q8TF72 1996 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ELOVL7A1L3X0 281 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 B4DXG7 233 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TMEM189-UBE2V1I3L0A0 370 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 MEN1O00255 615 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TERTO14746 1132 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 KERAO60938 352 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ALPLP05186 524 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ZNF888P0CJ79 500 aaPredicted RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 GNALP38405 381 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 FCGRTP55899 365 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 HNRNPKP61978 463 aaKnown RBP eCLIP2.83□□□□□ -1.965e-7■■■■□ 21.9
CHD9-203ENST00000447540 FMO1Q01740 532 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TMEM95Q3KNT9 176 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 RFTN2Q52LD8 501 aaPredicted RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 C22orf15Q8WYQ4 148 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 EXOSC8Q96B26 276 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 DCPSQ96C86 337 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 OR14A2Q96R54 314 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 POTEKPQ9BYX7 375 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TUBA4BQ9H853 241 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 CHST7Q9NS84 486 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TMEM184CQ9NVA4 438 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 GGA3Q9NZ52 723 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 FZD4Q9ULV1 537 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 CNTN6Q9UQ52 1028 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 CNTNAP5Q8WYK1 1306 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 LAMB1P07942 1786 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 NALCNQ8IZF0 1738 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 MARF1Q9Y4F3 1742 aaKnown RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 TMEM72A0PK05 275 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 SMCO3A2RU48 225 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 NOBOXO60393 691 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ARL6IP5O75915 188 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 LAG3P18627 525 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 PTGER2P43116 358 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 SLC35A2P78381 396 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ZNF33AQ06730 810 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 PEX6Q13608 980 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 IL34Q6ZMJ4 242 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 IFNEQ86WN2 208 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-203ENST00000447540 FTMTQ8N4E7 242 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 C15orf54Q8N8G6 183 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 OR52N2Q8NGI0 321 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TAS1R2Q8TE23 839 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TBCKQ8TEA7 893 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 GMCL1Q96IK5 515 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 PNMA5Q96PV4 448 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 SLITRK1Q96PX8 696 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 OR4K3Q96R72 315 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 SLC38A3Q99624 504 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ARHGAP39Q9C0H5 1083 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 KCTD10Q9H3F6 313 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 BRD7Q9NPI1 651 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 GOLT1BQ9Y3E0 138 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 FBXO7Q9Y3I1 522 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 KIF26BQ2KJY2 2108 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TP53BP1Q12888 1972 aaPredicted RBP2.83□□□□□ -1.96
CHD9-203ENST00000447540 C5orf52A6NGY3 159 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 RRN3P2A6NIE6 340 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L5A8MUK1 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L15C9J2P7 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L12C9JPN9 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L11C9JVI0 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L21D6R901 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L18D6R9N7 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L22D6RA61 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L19D6RCP7 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L20D6RJB6 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 IL3P08700 152 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TYMPP19971 482 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 NUDT6P53370 316 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ACY1Q03154 408 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 USP17L24Q0WX57 530 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 GUK1Q16774 197 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 BCL7AQ4VC05 210 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 C3orf38Q5JPI3 329 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 ARHGAP40Q5TG30 622 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 TAPT1Q6NXT6 567 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 CASP12Q6UXS9 341 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 CYP2R1Q6VVX0 501 aa2.83□□□□□ -1.96
CHD9-203ENST00000447540 NDUFAF7Q7L592 441 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms