RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ERI3O43414 337 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 HSD3B1P14060 373 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 SPINK2P20155 84 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 PTX3P26022 381 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 HSD3B2P26439 372 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 PLA2G16P53816 162 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 SEC24CP53992 1094 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 STXBP1P61764 594 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 GABREP78334 506 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 IMPG1Q17R60 797 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 C10orf62Q5T681 223 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 DEPDC1Q5TB30 811 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 VWA5B1Q5TIE3 1220 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 TMEM214Q6NUQ4 689 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 TLDC1Q6P9B6 456 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 Q6ZSR9 355 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 CHSY3Q70JA7 882 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 PRSS41Q7RTY9 318 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 TRIM46Q7Z4K8 759 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 UBE3DQ7Z6J8 389 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 KIRREL3Q8IZU9 778 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 UTP15Q8TED0 518 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 MS4A6EQ96DS6 147 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 C19orf60Q96EN9 201 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 TAAR9Q96RI9 348 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 SERPINI1Q99574 410 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 MRPL1Q9BYD6 325 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 REXO4Q9GZR2 422 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 BRF2Q9HAW0 419 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 KLK13Q9UKR3 277 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 CCL27Q9Y4X3 112 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 B3GALT1Q9Y5Z6 326 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 USH1CQ9Y6N9 552 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 CROCCQ5TZA2 2017 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 ATP6AP2A0A1C7CYW4 349 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 SERTM1A2A2V5 107 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC28A1O00337 649 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZNF195O14628 629 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 SCRG1O75711 98 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ATP6AP2O75787 350 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 TNFSF15O95150 251 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 NTRK1P04629 796 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZNF28P17035 718 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 IL1RNP18510 177 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 GCGRP47871 477 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 RAP1GDS1P52306 607 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZNF33BQ06732 778 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 NR6A1Q15406 480 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ADPRMQ3LIE5 342 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 XKR7Q5GH72 579 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 CGB2Q6NT52 195 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 CYB5D1Q6P9G0 228 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 METTL27Q8N6F8 245 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 GBP7Q8N8V2 638 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 GAL3ST3Q96A11 431 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 CHMP6Q96FZ7 201 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 C17orf62Q9BQA9 187 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 NDC1Q9BTX1 674 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ACTR5Q9H9F9 607 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 NPHS2Q9NP85 383 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ENAMQ9NRM1 1142 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 CUTCQ9NTM9 273 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 DHCR7Q9UBM7 475 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 VPS29Q9UBQ0 182 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 VTI1BQ9UEU0 232 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 NDOR1Q9UHB4 597 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 PPT2Q9UMR5 302 aa17.1■□□□□ 0.33
TRAPPC4-203ENST00000447216 GOLGA8QA0A0J9YX86 632 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 GOLGA8OA6NCC3 632 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 C9orf172C9J069 976 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 GOLGA8NF8WBI6 632 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLCO1B7G3V0H7 640 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 PLPP1O14494 284 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SDHDO14521 159 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 RGS14O43566 566 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SMIM10L1P0DMW3 83 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 RAB15P59190 212 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 CUL3Q13618 768 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC9B1Q4ZJI4 515 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 TMEM35AQ53FP2 167 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 MANEAQ5SRI9 462 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 DCAF12Q5T6F0 453 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 C1orf189Q5VU69 101 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 ABHD17CQ6PCB6 329 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 RNF165Q6ZSG1 346 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 TTLL10Q6ZVT0 673 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 BPHLQ86WA6 291 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 AMER3Q8N944 861 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC38A9Q8NBW4 561 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 OR2L5Q8NG80 312 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 RGMAQ96B86 450 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 APIPQ96GX9 242 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SMIM10Q96HG1 83 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC7A5P2Q9GIP4 190 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms