RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLU7O95391 586 aaKnown RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 BMP10O95393 424 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 HEXBP07686 556 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 CXCR2P25025 360 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 EMP2P54851 167 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 ALDH18A1P54886 795 aaKnown RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 EEF1A2Q05639 463 aaKnown RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 HERC3Q15034 1050 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 MFSD4BQ5TF39 518 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 PTGR2Q8N8N7 351 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 TRPV3Q8NET8 790 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 OR11G2Q8NGC1 345 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 WDR34Q96EX3 536 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 PTCD3Q96EY7 689 aaKnown RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 PEX11GQ96HA9 241 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 FER1L6-AS2Q96M78 137 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 TGIF2Q9GZN2 237 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 EHD1Q9H4M9 534 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 PSMC3IPQ9P2W1 217 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 MKL2Q9ULH7 1088 aa14.03□□□□□ -0.16
HDAC4-204ENST00000446876 ZNF490Q9ULM2 529 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-204ENST00000446876 SMIM23A6NLE4 172 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 B8ZZF3 427 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 CDC123O75794 336 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-204ENST00000446876 TBX6O95947 436 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-204ENST00000446876 IGHEP01854 428 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 SERPINA6P08185 405 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 RBP1P09455 135 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 ACPPP15309 386 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 HNRNPH1P31943 449 aaKnown RBP14.02□□□□□ -0.17
HDAC4-204ENST00000446876 SLCO1A2P46721 670 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 NAA30Q147X3 362 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-204ENST00000446876 TSNAXIP1Q2TAA8 658 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 TUBB8Q3ZCM7 444 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 MINDY4Q4G0A6 757 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 LGSNQ5TDP6 509 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 TCTN3Q6NUS6 607 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 TIFABQ6ZNK6 161 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 ASB18Q6ZVZ8 466 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 ABHD13Q7L211 337 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 PRICKLE2Q7Z3G6 844 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 GOLGA7Q7Z5G4 137 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 CLEC1AQ8NC01 280 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 MZB1Q8WU39 189 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 PHF21BQ96EK2 531 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 EFCAB11Q9BUY7 163 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 VN1R1Q9GZP7 353 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 NT5DC2Q9H857 520 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 COPG2Q9UBF2 871 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 ANGPTL3Q9Y5C1 460 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 CFAP46Q8IYW2 2715 aa14.02□□□□□ -0.17
HDAC4-204ENST00000446876 IQANK1A0A1B0GTG1 560 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 CCDC189A1A4V9 331 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 ANKDD1BA6NHY2 528 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PYCARD-AS1I3L0S3 204 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 CHST10O43529 356 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 SH3BGRLO75368 114 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 WFS1O76024 890 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 SBK3P0C264 359 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 SMIM10L1P0DMW3 83 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PCNAP12004 261 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 COX6A1P12074 109 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 COL6A2P12110 1019 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 EPB42P16452 691 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 EEF1DP29692 281 aaKnown RBP14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PGDP52209 483 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 Q0VFX4 171 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PCBP2Q15366 365 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■■■□ 21.4
HDAC4-204ENST00000446876 TBCCQ15814 346 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 LANCL3Q6ZV70 420 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 RPS27LQ71UM5 84 aaKnown RBP14.01□□□□□ -0.17
HDAC4-204ENST00000446876 MYLK4Q86YV6 388 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PARP9Q8IXQ6 854 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 GALNT16Q8N428 558 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 RNF175Q8N4F7 328 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 TTLQ8NG68 377 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 EPS8L3Q8TE67 593 aaKnown RBP14.01□□□□□ -0.17
HDAC4-204ENST00000446876 MTBPQ96DY7 904 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 SMIM10Q96HG1 83 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF160Q9HCG1 818 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PRM3Q9NNZ6 103 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 GPR83Q9NYM4 423 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 TMEM216Q9P0N5 145 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 FETUBQ9UGM5 382 aa14.01□□□□□ -0.17
HDAC4-204ENST00000446876 PCDHGA9Q9Y5G4 932 aaKnown RBP14.01□□□□□ -0.17
HDAC4-204ENST00000446876 HEMK1Q9Y5R4 338 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-204ENST00000446876 SPTA1P02549 2419 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 IGHV3-20A0A0C4DH32 117 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 A0A1W2PPM1 405 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 LRIT2A6NDA9 550 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 E2F3O00716 465 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 ERI3O43414 337 aaKnown RBP14□□□□□ -0.17
HDAC4-204ENST00000446876 SMIM24O75264 130 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 CLEC3AO75596 197 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 CELA2AP08217 269 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 PYGBP11216 843 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 ITGA3P26006 1051 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 HSD17B3P37058 310 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 CASP2P42575 452 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 PLA2G16P53816 162 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms