RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 PCDHGA7Q9Y5G6 932 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 A0A088AWK7 358 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 H0YIG0 161 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PCDH17O14917 1159 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 LSM1O15116 133 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 LYPLA1O75608 230 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 MT-CO3P00414 261 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 SLC35G6P0C7Q6 338 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 TYRP1P17643 537 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 ZNF10P21506 573 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 ALDH4A1P30038 563 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PPP1CAP62136 330 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 GNGT1P63211 74 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 EMX2Q04743 252 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 BTKQ06187 659 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 GRM7Q14831 915 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 KIAA0040Q15053 153 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 NDUFA9Q16795 377 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PRMT9Q6P2P2 845 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 MAVSQ7Z434 540 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 DRAXINQ8NBI3 349 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 ATP6V1E2Q96A05 226 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 ESAMQ96AP7 390 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 ACPTQ9BZG2 426 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 SPRY4Q9C004 299 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 KCNK13Q9HB14 408 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 LYRM4Q9HD34 91 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 AHSPQ9NZD4 102 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 AKAP7Q9P0M2 348 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 RUVBL1Q9Y265 456 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 WDR91A4D1P6 747 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 LRIT2A6NDA9 550 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PPP6CO00743 305 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 KCNK5O95279 499 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PDYNP01213 254 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PRPS2P11908 318 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 HOXB3P14651 431 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 FOXA1P55317 472 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 ITGA1P56199 1179 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 TUBB3Q13509 450 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 HERC3Q15034 1050 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 GSTA3Q16772 222 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 MRM1Q6IN84 353 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 CAMKMTQ7Z624 323 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 ZNF761Q86XN6 746 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 CPSF7Q8N684 471 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 NATD1Q8N6N6 113 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 TTC29Q8NA56 475 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 TSPEARQ8WU66 669 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 C10orf82Q8WW14 230 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 STARD8Q92502 1023 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 RERGQ96A58 199 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 MS4A6EQ96DS6 147 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 NRTNQ99748 197 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 CENPKQ9BS16 269 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 LYARQ9NX58 379 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 VPS29Q9UBQ0 182 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 ASXL3Q9C0F0 2248 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 IGLV3-12A0A075B6K2 115 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 GOLGA8QA0A0J9YX86 632 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 GOLGA8OA6NCC3 632 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 ANKDD1BA6NHY2 528 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 GOLGA8NF8WBI6 632 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 H0YGG7 62 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 DSCR3O14972 297 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 NDUFS4O43181 175 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 LCMT2O60294 686 aaKnown RBP8.35□□□□□ -1.07
FXR1-203ENST00000445140 SNX3O60493 162 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 NSA2O95478 260 aaKnown RBP8.35□□□□□ -1.07
FXR1-203ENST00000445140 CD63P08962 238 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 RORAP35398 523 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 ARF3P61204 181 aaPredicted RBP8.35□□□□□ -1.07
FXR1-203ENST00000445140 ERVK-8P63133 956 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 MFSD4BQ5TF39 518 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 NKAIN2Q5VXU1 208 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 RHBDD2Q6NTF9 364 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 ZNF517Q6ZMY9 492 aaPredicted RBP8.35□□□□□ -1.07
FXR1-203ENST00000445140 Q6ZSR9 355 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 MSANTD1Q6ZTZ1 278 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 ABHD13Q7L211 337 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 PAGE2Q7Z2X7 111 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 SLCO6A1Q86UG4 719 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 CDYL2Q8N8U2 506 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 Q8N9G6 341 aaPredicted RBP8.35□□□□□ -1.07
FXR1-203ENST00000445140 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.35□□□□□ -1.075e-8■■■□□ 18.4
FXR1-203ENST00000445140 SELENOMQ8WWX9 145 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 JPH3Q8WXH2 748 aaPredicted RBP8.35□□□□□ -1.07
FXR1-203ENST00000445140 FKBP10Q96AY3 582 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 RGMAQ96B86 450 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 MTERF3Q96E29 417 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 SPDL1Q96EA4 605 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 KCNC2Q96PR1 638 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 AICDAQ9GZX7 198 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 SLC26A1Q9H2B4 701 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 FAM60AQ9NP50 221 aa8.35□□□□□ -1.07
FXR1-203ENST00000445140 SLCO1B3Q9NPD5 702 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms