RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 RBMS1P29558 406 aaKnown RBP15.02■□□□□ -0
USP40-206ENST00000443711 HNRNPH1P31943 449 aaKnown RBP15.02■□□□□ -0
USP40-206ENST00000443711 GABREP78334 506 aa15.02■□□□□ -0
USP40-206ENST00000443711 IMPG1Q17R60 797 aa15.02■□□□□ -0
USP40-206ENST00000443711 TMEM214Q6NUQ4 689 aaKnown RBP15.02■□□□□ -0
USP40-206ENST00000443711 ABHD13Q7L211 337 aa15.02■□□□□ -0
USP40-206ENST00000443711 TRIM46Q7Z4K8 759 aa15.02■□□□□ -0
USP40-206ENST00000443711 DDIASQ8IXT1 998 aa15.02■□□□□ -0
USP40-206ENST00000443711 GAL3ST3Q96A11 431 aa15.02■□□□□ -0
USP40-206ENST00000443711 RGMAQ96B86 450 aa15.02■□□□□ -0
USP40-206ENST00000443711 MS4A6EQ96DS6 147 aa15.02■□□□□ -0
USP40-206ENST00000443711 HBEGFQ99075 208 aa15.02■□□□□ -0
USP40-206ENST00000443711 REXO4Q9GZR2 422 aaKnown RBP15.02■□□□□ -0
USP40-206ENST00000443711 OR51B5Q9H339 312 aa15.02■□□□□ -0
USP40-206ENST00000443711 KLHL31Q9H511 634 aa15.02■□□□□ -0
USP40-206ENST00000443711 ACTR5Q9H9F9 607 aaPredicted RBP15.02■□□□□ -0
USP40-206ENST00000443711 CUTCQ9NTM9 273 aa15.02■□□□□ -0
USP40-206ENST00000443711 VPS29Q9UBQ0 182 aa15.02■□□□□ -0
USP40-206ENST00000443711 SLC12A4Q9UP95 1085 aa15.02■□□□□ -0
USP40-206ENST00000443711 B3GALT1Q9Y5Z6 326 aa15.02■□□□□ -0
USP40-206ENST00000443711 SLC22A7Q9Y694 548 aa15.02■□□□□ -0
USP40-206ENST00000443711 SEC16AO15027 2179 aa15.02□□□□□ -0.01
USP40-206ENST00000443711 PIP5K1BO14986 540 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 HDAC3O15379 428 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 RGS14O43566 566 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 SH3BGRLO75368 114 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 SKAP2O75563 359 aaPredicted RBP15.01□□□□□ -0.01
USP40-206ENST00000443711 LINC00032P0C843 101 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 ZNF888P0CJ79 500 aaPredicted RBP15.01□□□□□ -0.01
USP40-206ENST00000443711 GCGRP47871 477 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 RAP1GDS1P52306 607 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 ARFIP1P53367 373 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 CAMK2BQ13554 666 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 FAM53BQ14153 422 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 HERC3Q15034 1050 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 TUBB8Q3ZCM7 444 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 TRIM40Q6P9F5 258 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 IGF2-ASQ6U949 168 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 WDR75Q8IWA0 830 aaKnown RBP15.01□□□□□ -0.01
USP40-206ENST00000443711 ARHGEF39Q8N4T4 335 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 OR2L5Q8NG80 312 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 ZCCHC10Q8TBK6 192 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 UTP15Q8TED0 518 aaKnown RBP15.01□□□□□ -0.01
USP40-206ENST00000443711 CLIP3Q96DZ5 547 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 C10orf90Q96M02 699 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 SLC46A1Q96NT5 459 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 ACPTQ9BZG2 426 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 AICDAQ9GZX7 198 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 TUBB1Q9H4B7 451 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 ANKHQ9HCJ1 492 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 TXLNGQ9NUQ3 528 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 AHSPQ9NZD4 102 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 MARCOQ9UEW3 520 aaPredicted RBP15.01□□□□□ -0.01
USP40-206ENST00000443711 KLK13Q9UKR3 277 aa15.01□□□□□ -0.01
USP40-206ENST00000443711 A0A088AWK7 358 aa15□□□□□ -0.01
USP40-206ENST00000443711 TRPC5OSA6NMA1 111 aa15□□□□□ -0.01
USP40-206ENST00000443711 C9orf172C9J069 976 aa15□□□□□ -0.01
USP40-206ENST00000443711 DSCR3O14972 297 aa15□□□□□ -0.01
USP40-206ENST00000443711 NVLO15381 856 aaKnown RBP15□□□□□ -0.01
USP40-206ENST00000443711 ERI3O43414 337 aaKnown RBP15□□□□□ -0.01
USP40-206ENST00000443711 CPNE3O75131 537 aaKnown RBP15□□□□□ -0.01
USP40-206ENST00000443711 KIAA0754O94854 1291 aa15□□□□□ -0.01
USP40-206ENST00000443711 SEMA3DO95025 777 aa15□□□□□ -0.01
USP40-206ENST00000443711 TIAF1O95411 115 aa15□□□□□ -0.01
USP40-206ENST00000443711 ETHE1O95571 254 aa15□□□□□ -0.01
USP40-206ENST00000443711 NTRK1P04629 796 aa15□□□□□ -0.01
USP40-206ENST00000443711 SMIM10L1P0DMW3 83 aa15□□□□□ -0.01
USP40-206ENST00000443711 ALOX12P18054 663 aa15□□□□□ -0.01
USP40-206ENST00000443711 ZNF10P21506 573 aaPredicted RBP15□□□□□ -0.01
USP40-206ENST00000443711 ALAS2P22557 587 aa15□□□□□ -0.01
USP40-206ENST00000443711 RAB8AP61006 207 aa15□□□□□ -0.01
USP40-206ENST00000443711 SKP1P63208 163 aa15□□□□□ -0.01
USP40-206ENST00000443711 BTKQ06187 659 aa15□□□□□ -0.01
USP40-206ENST00000443711 RTP5Q14D33 572 aa15□□□□□ -0.01
USP40-206ENST00000443711 PDCD2Q16342 344 aaPredicted RBP15□□□□□ -0.01
USP40-206ENST00000443711 SPDYAQ5MJ70 313 aa15□□□□□ -0.01
USP40-206ENST00000443711 PRAMEF17Q5VTA0 474 aa15□□□□□ -0.01
USP40-206ENST00000443711 RHBDD2Q6NTF9 364 aa15□□□□□ -0.01
USP40-206ENST00000443711 NIPAL1Q6NVV3 410 aa15□□□□□ -0.01
USP40-206ENST00000443711 TTLL10Q6ZVT0 673 aa15□□□□□ -0.01
USP40-206ENST00000443711 PMEPA1Q969W9 287 aa15□□□□□ -0.01
USP40-206ENST00000443711 SMIM10Q96HG1 83 aa15□□□□□ -0.01
USP40-206ENST00000443711 TBCDQ9BTW9 1192 aa15□□□□□ -0.01
USP40-206ENST00000443711 SCNM1Q9BWG6 230 aa15□□□□□ -0.01
USP40-206ENST00000443711 ULBP3Q9BZM4 244 aa15□□□□□ -0.01
USP40-206ENST00000443711 ROGDIQ9GZN7 287 aa15□□□□□ -0.01
USP40-206ENST00000443711 RIC8BQ9NVN3 520 aa15□□□□□ -0.01
USP40-206ENST00000443711 NDOR1Q9UHB4 597 aa15□□□□□ -0.01
USP40-206ENST00000443711 CDC14AQ9UNH5 594 aa15□□□□□ -0.01
USP40-206ENST00000443711 MRPS2Q9Y399 296 aaKnown RBP15□□□□□ -0.01
USP40-206ENST00000443711 NEUROG3Q9Y4Z2 214 aa15□□□□□ -0.01
USP40-206ENST00000443711 A0A1B0GX78 115 aa14.99□□□□□ -0.01
USP40-206ENST00000443711 SAP18O00422 153 aaKnown RBP14.99□□□□□ -0.01
USP40-206ENST00000443711 RSL1D1O76021 490 aaKnown RBP14.99□□□□□ -0.01
USP40-206ENST00000443711 AVPR1BP47901 424 aa14.99□□□□□ -0.01
USP40-206ENST00000443711 PLA2G16P53816 162 aa14.99□□□□□ -0.01
USP40-206ENST00000443711 GNGT1P63211 74 aa14.99□□□□□ -0.01
USP40-206ENST00000443711 BTN3A2P78410 334 aa14.99□□□□□ -0.01
USP40-206ENST00000443711 HMGCS1Q01581 520 aa14.99□□□□□ -0.01
USP40-206ENST00000443711 AP5B1Q2VPB7 878 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms