RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SMSP52788 366 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 IST1P53990 364 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 EPHA4P54764 986 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 GDF10P55107 478 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CASP6P55212 293 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 KCNK10P57789 538 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 EIF3EP60228 445 aaKnown RBP6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PHC1P78364 1004 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CD300CQ08708 224 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 HSPA14Q0VDF9 509 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 Q0VFX4 171 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 MERTKQ12866 999 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PCLAFQ15004 111 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 NRF1Q16656 503 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 HADHQ16836 314 aaKnown RBP6.21□□□□□ -1.42
HDAC6-210ENST00000441703 UGP2Q16851 508 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CCNYL2Q5T2Q4 361 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 STEAP4Q687X5 459 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 FCRL6Q6DN72 434 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 GTF2IRD2BQ6EKJ0 949 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 HMBOX1Q6NT76 420 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ZNF773Q6PK81 442 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 IGFL3Q6UXB1 125 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 HACD2Q6Y1H2 254 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 MEX3BQ6ZN04 569 aaKnown RBP6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ZCCHC23Q6ZST2 131 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 KIAA0408Q6ZU52 694 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 FAM183BPQ6ZVS7 135 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 KCTD8Q6ZWB6 473 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CHSY3Q70JA7 882 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 GTF2IRD2Q86UP8 949 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 TMEM200AQ86VY9 491 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PRIMA1Q86XR5 153 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 RAB43Q86YS6 212 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ARMC8Q8IUR7 673 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ZC3H7AQ8IWR0 971 aaKnown RBP6.21□□□□□ -1.42
HDAC6-210ENST00000441703 MYO1HQ8N1T3 1032 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ZNF786Q8N393 782 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PAF1Q8N7H5 531 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CLEC1AQ8NC01 280 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SLC37A2Q8TED4 501 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ZNF606Q8WXB4 792 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 LRTOMTQ8WZ04 291 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 NT5C3BQ969T7 300 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ATP6V1E2Q96A05 226 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SLCO4A1Q96BD0 722 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CLIP3Q96DZ5 547 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CFAP36Q96G28 342 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SNX18Q96RF0 628 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 NPY6RQ99463 290 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SPOCK3Q9BQ16 436 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 WDR77Q9BQA1 342 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-210ENST00000441703 C11orf70Q9BRQ4 267 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 C9orf16Q9BUW7 83 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 OR2B2Q9GZK3 357 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 RETREG1Q9H6L5 497 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 COG4Q9H9E3 785 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SIAEQ9HAT2 523 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ANKHQ9HCJ1 492 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PCDH12Q9NPG4 1184 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 TCF7L2Q9NQB0 619 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SMYD2Q9NRG4 433 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SEMA3GQ9NS98 782 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SACM1LQ9NTJ5 587 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 MOCS1Q9NZB8 636 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PKD2L2Q9NZM6 624 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 ZC3H7BQ9UGR2 993 aaKnown RBP6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SH3BGRL2Q9UJC5 107 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 MID2Q9UJV3 735 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 STAP1Q9ULZ2 295 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PRELID1Q9Y255 219 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 UGT2A1Q9Y4X1 527 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 PCDHGA11Q9Y5H2 935 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 CSPG4Q6UVK1 2322 aa6.21□□□□□ -1.42
HDAC6-210ENST00000441703 SAC3D1A6NKF1 404 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 AQP12BA6NM10 295 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 SYCE1LA8MT33 242 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 EVPLLA8MZ36 301 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 H0YAE9 185 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 APOC4-APOC2K7ER74 178 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 DLGAP1O14490 977 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 PHGDHO43175 533 aaKnown RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 CST8O60676 142 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 PIAS1O75925 651 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 RECQL5O94762 991 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 PIGNO95427 931 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 CLDN14O95500 239 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 LSM8O95777 96 aaKnown RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 APOC2P02655 101 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 ENO2P09104 434 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 ELFN1P0C7U0 828 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 UBL4AP11441 157 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 ZNF182P17025 639 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 TFE3P19532 575 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 MMP8P22894 467 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 EEF1DP29692 281 aaKnown RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 GNA15P30679 374 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 DNAJA1P31689 397 aaKnown RBP6.2□□□□□ -1.42
HDAC6-210ENST00000441703 CAPGP40121 348 aa6.2□□□□□ -1.42
HDAC6-210ENST00000441703 OPRL1P41146 370 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms