RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ZNF638Q14966 1978 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 H3BN98 237 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ADAMDEC1O15204 470 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 AOC2O75106 756 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ULK1O75385 1050 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 VPS26AO75436 327 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ESR1P03372 595 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PSMA1P25786 263 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 GKP32189 559 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SDC2P34741 201 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 NUDT1P36639 197 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 AVPR1BP47901 424 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 MLLT6P55198 1093 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 IL2P60568 153 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 CXCR4P61073 352 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SEMA3BQ13214 749 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ARHGEF7Q14155 803 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 TIMM50Q3ZCQ8 353 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 BRAT1Q6PJG6 821 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SHFQ7M4L6 423 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 LRRTM3Q86VH5 581 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 MIB1Q86YT6 1006 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 LGI4Q8N135 537 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PCED1BQ96HM7 432 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 COPS8Q99627 209 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 MRIQ9BWK5 157 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 MED28Q9H204 178 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 STARD7Q9NQZ5 370 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 LATS2Q9NRM7 1088 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 GTF2A1LQ9UNN4 478 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 GREB1LQ9C091 1923 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 GOLGA4Q13439 2230 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SMIM28A0A1B0GU29 152 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 E2F3O00716 465 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PCDH17O14917 1159 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SYN3O14994 580 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SHOXO15266 292 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 HPGDSO60760 199 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 C1QBP02746 253 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PRR35P0CG20 571 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ARSBP15848 533 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 RPS5P46782 204 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PSPHP78330 225 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 NFKB2Q00653 900 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 BNC1Q01954 994 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 BCL2L1Q07817 233 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 CRYZQ08257 329 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 MN1Q10571 1320 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 DCAF15Q66K64 600 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 TMEM81Q6P7N7 255 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 FAM83AQ86UY5 434 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 MEX3DQ86XN8 651 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PIANPQ8IYJ0 282 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 KCT2Q8NC54 265 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SMG7Q92540 1137 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 PIGKQ92643 395 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 RADILQ96JH8 1075 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ZIC5Q96T25 663 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 NUSAP1Q9BXS6 441 aaKnown RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 CLEC4MQ9H2X3 399 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 CRTAC1Q9NQ79 661 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ZNF226Q9NYT6 803 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 ZNF624Q9P2J8 865 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-214ENST00000441542 SSR3Q9UNL2 185 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
HDAC9-214ENST00000441542 IGKV6D-21A0A0A0MT36 114 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CHURC1-FNTBB4DL54 471 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CLIC1O00299 241 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LDB2O43679 373 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 HBP1O60381 514 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 C22orf31O95567 290 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PRKAR1AP10644 381 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 BCKDHAP12694 445 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SRCP12931 536 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PEPDP12955 493 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 KDELR2P33947 212 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 GNPDA1P46926 289 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CLCN4P51793 760 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CTBP2P56545 445 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 DSTNP60981 165 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SEMG2Q02383 582 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ZNF235Q14590 738 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LARS2Q15031 903 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 AANATQ16613 207 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 EXOC3L2Q2M3D2 409 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PSAPL1Q6NUJ1 521 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CNIH2Q6PI25 160 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 IL20RBQ6UXL0 311 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CREB3L2Q70SY1 520 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PDZD3Q86UT5 571 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ZZZ3Q8IYH5 903 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TAGAPQ8N103 731 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CRYBG2Q8N1P7 616 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LRRC17Q8N6Y2 441 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ST8SIA4Q92187 359 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ZBED6CLQ96FA7 236 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TOE1Q96GM8 510 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms