RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TAF10Q12962 218 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 SF1Q15637 639 aaKnown RBP19.53■□□□□ 0.72
SHOX2-203ENST00000441443 C5orf22Q49AR2 442 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 ZNF598Q86UK7 904 aaKnown RBP19.53■□□□□ 0.72
SHOX2-203ENST00000441443 LGI4Q8N135 537 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 ZNF557Q8N988 423 aaPredicted RBP19.53■□□□□ 0.72
SHOX2-203ENST00000441443 PSKH2Q96QS6 385 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 RNF121Q9H920 327 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 ABCB9Q9NP78 766 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 MARCH2Q9P0N8 246 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 AFF4Q9UHB7 1163 aaKnown RBP19.53■□□□□ 0.72
SHOX2-203ENST00000441443 YY2O15391 372 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 CSF3P09919 207 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 PRPS2P11908 318 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 UQCRC1P31930 480 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 FCHO2Q0JRZ9 810 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 EXOC3L2Q2M3D2 409 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 FAM151BQ6UXP7 276 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 KRT73Q86Y46 540 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 OR4M1Q8NGD0 313 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 UBA2Q9UBT2 640 aaPredicted RBP19.53■□□□□ 0.72
SHOX2-203ENST00000441443 CLEC2DQ9UHP7 191 aa19.53■□□□□ 0.72
SHOX2-203ENST00000441443 TMEM88BA6NKF7 163 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 TMCC2O75069 709 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 STK16O75716 305 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 ACPPP15309 386 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 RGS4P49798 205 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 NKX3-2P78367 333 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 RUNX1T1Q06455 604 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 ALG1LQ6GMV1 187 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 ERICH5Q6P6B1 374 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 SLC24A5Q71RS6 500 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 TAPBPLQ9BX59 468 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 GPR62Q9BZJ7 368 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 CMAHPQ9Y471 501 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 TMEM229AB2RXF0 380 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 CYP17A1P05093 508 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 CHRM5P08912 532 aaPredicted RBP19.52■□□□□ 0.72
SHOX2-203ENST00000441443 EPORP19235 508 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 ACLYP53396 1101 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 SREBF2Q12772 1141 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 BTBD16Q32M84 506 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 RDH10Q8IZV5 341 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 ANKK1Q8NFD2 765 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 TTLL2Q9BWV7 592 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 CDCA4Q9BXL8 241 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 TPT1P8Q9HAU6 139 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 TMPRSS11EQ9UL52 423 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 FZD4Q9ULV1 537 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 SCML2Q9UQR0 700 aa19.52■□□□□ 0.72
SHOX2-203ENST00000441443 UBL4AP11441 157 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 TYMPP19971 482 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 POU1F1P28069 291 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 CHCHD4Q8N4Q1 142 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.51■□□□□ 0.71
SHOX2-203ENST00000441443 LINC01599Q8WXQ3 324 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 EID2BQ96D98 161 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 C8orf48Q96LL4 319 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 UROC1Q96N76 676 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 J3KTA2 159 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 ARHGEF9O43307 516 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 CTPS1P17812 591 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 ERP29P30040 261 aaKnown RBP19.51■□□□□ 0.71
SHOX2-203ENST00000441443 MLLT3P42568 568 aaPredicted RBP19.51■□□□□ 0.71
SHOX2-203ENST00000441443 ASAH1Q13510 395 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 PTGES3Q15185 160 aaKnown RBP19.51■□□□□ 0.71
SHOX2-203ENST00000441443 UGT8Q16880 541 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 PDZK1Q5T2W1 519 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 SDE2Q6IQ49 451 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 BBS7Q8IWZ6 715 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 NLGN4YQ8NFZ3 816 aaPredicted RBP19.51■□□□□ 0.71
SHOX2-203ENST00000441443 IL4I1Q96RQ9 567 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 CCSER2Q9H7U1 834 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 POFUT2Q9Y2G5 429 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 ALPPP05187 535 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 WNT3P56703 355 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 SERPINA9Q86WD7 417 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 SYNPOQ8N3V7 929 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 C9orf43Q8TAL5 461 aaPredicted RBP19.51■□□□□ 0.71
SHOX2-203ENST00000441443 COPS8Q99627 209 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 DOHHQ9BU89 302 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 CRISPLD1Q9H336 500 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 NARFLQ9H6Q4 476 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 ATP13A2Q9NQ11 1180 aa19.51■□□□□ 0.71
SHOX2-203ENST00000441443 FABP12A6NFH5 140 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 HLA-EP13747 358 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 COX7A2P14406 83 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 PKLRP30613 574 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 TWF1Q12792 350 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 DUSP4Q13115 394 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 SLC35F1Q5T1Q4 408 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 SAXO2Q658L1 398 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 PLAG1Q6DJT9 500 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 CCDC149Q6ZUS6 474 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 PTCHD4Q6ZW05 846 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 ABI3BPQ7Z7G0 1075 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 RNF180Q86T96 592 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 SYT12Q8IV01 421 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 IQCF2Q8IXL9 164 aa19.5■□□□□ 0.71
SHOX2-203ENST00000441443 STK40Q8N2I9 435 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms