RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CLCA2Q9UQC9 943 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HS3ST3A1Q9Y663 406 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HSPE1-MOB4S4R3N1 261 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PIKFYVEQ9Y2I7 2098 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HELZ2Q9BYK8 2649 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 FAM220BPB1ANY3 271 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 K7EPI3 171 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 LSM1O15116 133 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PPM1DO15297 605 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 AKAP10O43572 662 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RFPL3O75679 317 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RSL1D1O76021 490 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 KCNH1O95259 989 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TRIM16O95361 564 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GIMD1P0DJR0 217 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 MYCLP1P12525 358 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HSD3B1P14060 373 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HOXB3P14651 431 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GGT1P19440 569 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ACRV1P26436 265 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HSD3B2P26439 372 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 VARSP26640 1264 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ITPKBP27987 946 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SPAM1P38567 509 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GRIA3P42263 894 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 NSG1P42857 185 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 BLKP51451 505 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CLCNKAP51800 687 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 AP1S2P56377 157 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PPP1CAP62136 330 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 LIPEQ05469 1076 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TMEM115Q12893 351 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GTF2H2Q13888 395 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GRB7Q14451 532 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 KIAA0040Q15053 153 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RBBP7Q16576 425 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 NADK2Q4G0N4 442 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 FAM98BQ52LJ0 330 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PLEKHS1Q5SXH7 462 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 LRIF1Q5T3J3 769 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GPRC6AQ5T6X5 926 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CACHD1Q5VU97 1274 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PEAR1Q5VY43 1037 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GTF2H2CQ6P1K8 395 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SBSNQ6UWP8 590 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 UNQ6494/PRO21346Q6UXR6 183 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TMPRSS9Q7Z410 1059 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PIP4P1Q86T03 277 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CFAP206Q8IYR0 622 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 NRSN1Q8IZ57 195 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SPATA6LQ8N4H0 392 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 HIPK4Q8NE63 616 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 OR4C6Q8NH72 309 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SLC37A2Q8TED4 501 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 VPS33AQ96AX1 596 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TESCQ96BS2 214 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CNBD2Q96M20 576 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 NSMCE2Q96MF7 247 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PPM1MQ96MI6 270 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 MCCC1Q96RQ3 725 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SLC38A3Q99624 504 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TMEM79Q9BSE2 394 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ADI1Q9BV57 179 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CD244Q9BZW8 370 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 UNKQ9C0B0 810 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PALMDQ9NP74 551 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PISDQ9UG56 409 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PACSIN3Q9UKS6 424 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PLAGL1Q9UM63 463 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SATB2Q9UPW6 733 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RNF11Q9Y3C5 154 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CCL27Q9Y4X3 112 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TEX51A0A1B0GUA7 166 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 C7orf72A4D263 438 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NPEPPSL1A6NEC2 478 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NUAK1O60285 661 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PCDHGA12O60330 932 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CSO75390 466 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 KRT6AP02538 564 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 KRT6BP04259 564 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF30P17039 623 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 KRT6CP48668 564 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ADARB1P78563 741 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 INSM1Q01101 510 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 HHEXQ03014 270 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TRAF3Q13114 568 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SRSF6Q13247 344 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SLC14A1Q13336 389 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ELOAQ14241 798 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 LRRC36Q1X8D7 754 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CCNYL2Q5T2Q4 361 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TTC23Q5W5X9 447 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ERICH5Q6P6B1 374 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 FAM92BQ6ZTR7 304 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 GOLGA7Q7Z5G4 137 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TECPR1Q7Z6L1 1165 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 GKN2Q86XP6 184 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PIANPQ8IYJ0 282 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NAGSQ8N159 534 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 DHRSXQ8N5I4 330 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms