RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C11orf96Q7Z7L8 435 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 HMGN2P46Q86SG4 172 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 TCEANCQ8N8B7 351 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 DNAJB8Q8NHS0 232 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 PCNPQ8WW12 178 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 APH1BQ8WW43 257 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CEP295NLQ96MC4 621 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CCDC32Q9BV29 185 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 C1QTNF3Q9BXJ4 246 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 UCK2Q9BZX2 261 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 GPBP1L1Q9HC44 474 aaPredicted RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 MIEF1Q9NQG6 463 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 KCTD5Q9NXV2 234 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 VPS29Q9UBQ0 182 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 DOCK1Q14185 1865 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 PIPSLA2A3N6 862 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ANKDD1BA6NHY2 528 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 EIF3FO00303 357 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 AOC2O75106 756 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 OR2B3O76000 313 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 PRLP01236 227 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 OR56A5P0C7T3 313 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SLC2A2P11168 524 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 KIAA0040Q15053 153 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 PTGES3Q15185 160 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 SPHARQ15513 63 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 WSCD2Q2TBF2 565 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 GPAT3Q53EU6 434 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 GCNT6Q5T4J0 391 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 DDI2Q5TDH0 399 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 LCN1P1Q5VSP4 162 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TNFAIP8L2Q6P589 184 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 LYPD8Q6UX82 237 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TPGS1Q6ZTW0 290 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ZNF367Q7RTV3 350 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CCDC28AQ8IWP9 274 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SLC35A5Q9BS91 424 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TMEM121BQ9BXQ6 578 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 CCDC59Q9P031 241 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 IL17CQ9P0M4 197 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CLEC2DQ9UHP7 191 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CLEC4AQ9UMR7 237 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 GRIP1Q9Y3R0 1128 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 MAU2Q9Y6X3 613 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 LTBP3Q9NS15 1303 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 GPX5O75715 221 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CLEC2LP0C7M8 214 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ITGA2P17301 1181 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 RPS3P23396 243 aaKnown RBP eCLIP8.72□□□□□ -1.012e-7■■■■□ 24.9
COPB1-202ENST00000439561 GJA5P36382 358 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CCT3P49368 545 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 FXNQ16595 210 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 POM121L1PQ3SYA9 428 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 FAM209AQ5JX71 171 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 MZT2BQ6NZ67 158 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ASB18Q6ZVZ8 466 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SERPINA11Q86U17 422 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 GLCCI1Q86VQ1 547 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 OR8H3Q8N146 312 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CELF5Q8N6W0 485 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 RASSF5Q8WWW0 418 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 DEDD2Q8WXF8 326 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ASB15Q8WXK1 588 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 POP5Q969H6 163 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 CMTM7Q96FZ5 175 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ART5Q96L15 291 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 PARK7Q99497 189 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 TMEM245Q9H330 911 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TBC1D17Q9HA65 648 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SERHLQ9NQF3 203 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ZNF624Q9P2J8 865 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 PCDHB8Q9UN66 801 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SLC6A14Q9UN76 642 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 NINQ8N4C6 2090 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TRBC2A0A5B9 178 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 MYADML2A6NDP7 307 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TLR4O00206 839 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 KDELR3O43731 214 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TLX2O43763 284 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 ENTPD6O75354 484 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ALX3O95076 343 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 IFNA14P01570 189 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 IFNW1P05000 195 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 CYP17A1P05093 508 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 PRKAR1AP10644 381 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 PLD1Q13393 1074 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SPOUT1Q5T280 376 aaKnown RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 KRT74Q7RTS7 529 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 ZNF551Q7Z340 670 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 TMPRSS11BQ86T26 416 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 GHDCQ8N2G8 530 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 C2orf73Q8N5S3 287 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 YIPF7Q8N8F6 280 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 C9orf43Q8TAL5 461 aaPredicted RBP8.72□□□□□ -1.01
COPB1-202ENST00000439561 KLHL6Q8WZ60 621 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 TRIB3Q96RU7 358 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 WACQ9BTA9 647 aa8.72□□□□□ -1.01
COPB1-202ENST00000439561 SLC29A3Q9BZD2 475 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms