RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TSLPQ969D9 159 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 KRT12Q99456 494 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 UTP23Q9BRU9 249 aaKnown RBP17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 GPAMQ9HCL2 828 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 MMP25Q9NPA2 562 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 LANCL2Q9NS86 450 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 TXNDC16Q9P2K2 825 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 RNF14Q9UBS8 474 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 CTNNAL1Q9UBT7 734 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 IKZF3Q9UKT9 509 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 SLC22A14Q9Y267 594 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 SVILO95425 2214 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 CHST10O43529 356 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 B4GALT2O60909 372 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 DCTP40126 519 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 HNF4AP41235 474 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 TDGF1P3P51864 188 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 CDKL1Q00532 357 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 REEP5Q00765 189 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 ILF2Q12905 390 aaKnown RBP17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 CALCOCO2Q13137 446 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 C1QL3Q5VWW1 255 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 NXPE4Q6UWF7 544 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 CYP4X1Q8N118 509 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 SPNS1Q9H2V7 528 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 SEC14L3Q9UDX4 400 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 SNX24Q9Y343 169 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 OARD1Q9Y530 152 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 ZGRF1Q86YA3 2104 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 DOPEY1Q5JWR5 2465 aa17.36■□□□□ 0.37
AC004540.1-201ENST00000439120 ZG16O60844 167 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 H2AFYO75367 372 aaKnown RBP17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 WDR47O94967 919 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 UNC5CO95185 931 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 B3GALT4O96024 378 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 RPL21P46778 160 aaKnown RBP17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 TAS2R39P59534 338 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 RAB8AP61006 207 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 OC90Q02509 493 aaPredicted RBP17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 RBPJQ06330 500 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 USP10Q14694 798 aaKnown RBP17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 H3F3CQ6NXT2 135 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 CRLF3Q8IUI8 442 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 HORMAD2Q8N7B1 307 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 UTP15Q8TED0 518 aaKnown RBP17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 PYROXD1Q8WU10 500 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 CDKL2Q92772 493 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 PTCHD1Q96NR3 888 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 RHOJQ9H4E5 214 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 CLK4Q9HAZ1 481 aaKnown RBP17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 POPDC3Q9HBV1 291 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 ANKRD10Q9NXR5 420 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 MOCS1Q9NZB8 636 aa17.35■□□□□ 0.37
AC004540.1-201ENST00000439120 TRGV8A0A0C4DH27 118 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 E7ESA3 106 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 PRMT3O60678 531 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 MLYCDO95822 493 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 RNH1P13489 461 aaKnown RBP17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 CD46P15529 392 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 GNAZP19086 355 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 SLC26A5P58743 744 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 TUBA3CQ13748 450 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 TSNQ15631 228 aaKnown RBP17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 ZRSR2Q15696 482 aaKnown RBP17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 TOR1AIP1Q5JTV8 583 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 TUBA3EQ6PEY2 450 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 ANKRD53Q8N9V6 530 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 ARMC2Q8NEN0 867 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 TSPAN17Q96FV3 270 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 FAR2Q96K12 515 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 RHBGQ9H310 441 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 KLHL1Q9NR64 748 aa17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 SUCOQ9UBS9 1254 aaKnown RBP17.34■□□□□ 0.37
AC004540.1-201ENST00000439120 POLEQ07864 2286 aa17.33■□□□□ 0.37
AC004540.1-201ENST00000439120 NCF1BA6NI72 391 aaPredicted RBP17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 GABRR3A8MPY1 467 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 NCF1CA8MVU1 366 aaPredicted RBP17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 SERPINA6P08185 405 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 NCF1P14598 390 aaPredicted RBP17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 EEF1DP29692 281 aaKnown RBP17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 STXBP1P61764 594 aaKnown RBP17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 PMP22Q01453 160 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 POU4F1Q01851 419 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 OR1C1Q15619 314 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 QSOX2Q6ZRP7 698 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 CEP97Q8IW35 865 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 TMEM178AQ8NBL3 297 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 FAM98AQ8NCA5 519 aaKnown RBP17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 TTLQ8NG68 377 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 ANKRD49Q8WVL7 239 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 CCT6BQ92526 530 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 SLC6A16Q9GZN6 736 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 DPH5Q9H2P9 285 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 SAYSD1Q9NPB0 183 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 PCDHGB6Q9Y5F9 930 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 CROCCQ5TZA2 2017 aa17.33■□□□□ 0.36
AC004540.1-201ENST00000439120 FAM227AF5H4B4 570 aa17.32■□□□□ 0.36
AC004540.1-201ENST00000439120 TP73O15350 636 aa17.32■□□□□ 0.36
AC004540.1-201ENST00000439120 DNAJB6O75190 326 aa17.32■□□□□ 0.36
AC004540.1-201ENST00000439120 C1GALT1C1LP0DN25 315 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms