RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MUC13Q9H3R2 512 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CD320Q9NPF0 282 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PRSS16Q9NQE7 514 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 MAP4K5Q9Y4K4 846 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ATG13O75143 517 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 SCELO95171 688 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 KLK1P06870 262 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 KDELR2P33947 212 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CRYBA2P53672 197 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 HBA1P69905 142 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 OCA2Q04671 838 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PDGFRLQ15198 375 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PLEKHS1Q5SXH7 462 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CPZQ66K79 652 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ZNF547Q8IVP9 402 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ADHFE1Q8IWW8 467 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 SPARTQ8N0X7 666 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 GOLM1Q8NBJ4 401 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 LSM14AQ8ND56 463 aaKnown RBP9.1□□□□□ -0.95
CUX1-206ENST00000437600 ZNF555Q8NEP9 628 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 TANKQ92844 425 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 UCN3Q969E3 161 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 HSH2DQ96JZ2 352 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 SLC29A3Q9BZD2 475 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 RHCGQ9UBD6 479 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 EXO1Q9UQ84 846 aaKnown RBP9.1□□□□□ -0.95
CUX1-206ENST00000437600 TESMINQ9Y4I5 508 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 EDDM13A0A1B0GTR0 161 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 FEZF1A0PJY2 475 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 J3KTA2 159 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PPM1DO15297 605 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 NME6O75414 186 aaPredicted RBP9.1□□□□□ -0.95
CUX1-206ENST00000437600 POP7O75817 140 aaKnown RBP9.1□□□□□ -0.95
CUX1-206ENST00000437600 EPN2O95208 641 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 VIPP01282 170 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PCCBP05166 539 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PRPS2P11908 318 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 FOSL2P15408 326 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PRPS1L1P21108 318 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 P2RY2P41231 377 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 PLA2G16P53816 162 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 MLLT10P55197 1068 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ISL1P61371 349 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 TBPL1P62380 186 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 GBX1Q14549 363 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 DUOXA1Q1HG43 343 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 VMACQ2NL98 169 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 TMEM31Q5JXX7 168 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 LRIF1Q5T3J3 769 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CPTPQ5TA50 214 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ATG9BQ674R7 924 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 FAM83HQ6ZRV2 1179 aaPredicted RBP9.1□□□□□ -0.95
CUX1-206ENST00000437600 OLIG3Q7RTU3 272 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CALHM3Q86XJ0 350 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ATG16L2Q8NAA4 619 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 SPPL2AQ8TCT8 520 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 GANCQ8TET4 914 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 WFIKKN2Q8TEU8 576 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 NACC2Q96BF6 587 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 NUS1Q96E22 293 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 DTD2Q96FN9 168 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 GUCD1Q96NT3 240 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CCM2Q9BSQ5 444 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 OSBPL6Q9BZF3 934 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 TMEM245Q9H330 911 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 RUBCNLQ9H714 662 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 ERVK-18Q9QC07 812 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 SLC23A2Q9UGH3 650 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 SAMHD1Q9Y3Z3 626 aaKnown RBP9.1□□□□□ -0.95
CUX1-206ENST00000437600 SNX8Q9Y5X2 465 aa9.1□□□□□ -0.95
CUX1-206ENST00000437600 CKAP5Q14008 2032 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 PRAMEF33A0A0G2JMD5 474 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 A0A1W2PP55 124 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 IGLON5A6NGN9 336 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 NARSO43776 548 aaKnown RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 PAK4O96013 591 aaPredicted RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 PSMB5P28074 263 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 MAT2AP31153 395 aaKnown RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 HLCSP50747 726 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 PSMD7P51665 324 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 SLBPQ14493 270 aaKnown RBP eCLIP9.09□□□□□ -0.95
CUX1-206ENST00000437600 KIAA1211LQ6NV74 962 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 BORAQ6PGQ7 559 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 KLHL17Q6TDP4 642 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 DDHD1Q8NEL9 900 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 OR5AR1Q8NGP9 310 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 OTUB1Q96FW1 271 aaPredicted RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 RIPOR3Q96MK2 946 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 CD207Q9UJ71 328 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 ASF1AQ9Y294 204 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 OR1A2Q9Y585 309 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 KCNE2Q9Y6J6 123 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 PSIP1O75475 530 aaKnown RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 C1orf105O95561 183 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 C6orf47O95873 294 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 CATP04040 527 aaKnown RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 ZNF8P17098 575 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms