RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 EIF3MQ7L2H7 374 aaKnown RBP10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 OTOP2Q7RTS6 562 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 NAGSQ8N159 534 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 SYNPOQ8N3V7 929 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 POC5Q8NA72 575 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 OR4K1Q8NGD4 311 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 HUS1BQ8NHY5 278 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 TMEM121BQ9BXQ6 578 aaPredicted RBP10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 CHST8Q9H2A9 424 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 ITM2CQ9NQX7 267 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 RAPGEFL1Q9UHV5 662 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 PMF1-BGLAPU3KQ54 211 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 PCM1Q15154 2024 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 C1orf226A1L170 272 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 SCAMP2O15127 329 aaKnown RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 PSIP1O75475 530 aaKnown RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 RFPL2O75678 378 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 NADKO95544 446 aaPredicted RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 TYRP14679 529 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 KRT20P35900 424 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 METAP1P53582 386 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 NCS1P62166 190 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 KCNJ10P78508 379 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 COX20Q5RI15 118 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 HENMT1Q5T8I9 393 aaKnown RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC39A5Q6ZMH5 540 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF540Q8NDQ6 660 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 OR7G3Q8NG95 312 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 ZFP90Q8TF47 636 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 SH3YL1Q96HL8 342 aaPredicted RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 PCDHB11Q9Y5F2 797 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 SAP18O00422 153 aaKnown RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC16A5O15375 505 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 TPPPO94811 219 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 ANXA4P09525 319 aaPredicted RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 TIMP2P16035 220 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 CSTF3Q12996 717 aaKnown RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 IL18R1Q13478 541 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 GRIN2CQ14957 1233 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 MAD2L1BPQ15013 274 aaPredicted RBP10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 DEFB115Q30KQ5 88 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 IER5LQ5T953 404 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM124AQ86V42 546 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM9CQ8IZT9 166 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 DTX3Q8N9I9 347 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 APH1BQ8WW43 257 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 RORBQ92753 470 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 NEIL2Q969S2 332 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 TBC1D20Q96BZ9 403 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 PKP4Q99569 1192 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 AMBNQ9NP70 447 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 KRT84Q9NSB2 600 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 COQ3Q9NZJ6 369 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 PCDHGB1Q9Y5G3 927 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.81
CLSTN1-203ENST00000435891 SERTM1A2A2V5 107 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 GABARAPO95166 117 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 VIPP01282 170 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 LCKP06239 509 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 JUNDP17535 347 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 IDSP22304 550 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 PSMB9P28065 219 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 RPS13P62277 151 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 MC1RQ01726 317 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 MVKQ03426 396 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 FOXD4Q12950 439 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 TSTA3Q13630 321 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 CLCA4Q14CN2 919 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 OXA1LQ15070 435 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 LY6G5CQ5SRR4 150 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 CATSPEREQ5SY80 951 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 TMEM236Q5W0B7 351 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM180BQ6P0A1 224 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 LILRA6Q6PI73 481 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 MSANTD1Q6ZTZ1 278 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 PGBD3Q8N328 593 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ZBP1Q9H171 429 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 CCDC177Q9NQR7 707 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 UCKL1Q9NWZ5 548 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM120CQ9NX05 1096 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 SH3BP4Q9P0V3 963 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 RUVBL1Q9Y265 456 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 BOLA1Q9Y3E2 137 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 JRKO75564 520 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 FGF18O76093 207 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 VIPR1P32241 457 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 OR1E2P47887 323 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 HNRNPFP52597 415 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 RPP38P78345 283 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 IFITM3Q01628 133 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 MEF2AQ02078 507 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 KEAP1Q14145 624 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 TEAD2Q15562 447 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 GPR153Q6NV75 609 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 SLCO6A1Q86UG4 719 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ANKMY1Q9P2S6 941 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms