RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 NAGSQ8N159 534 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 ATG16L2Q8NAA4 619 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 TMIEQ8NEW7 156 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 SLC5A11Q8WWX8 675 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 NXPE3Q969Y0 559 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 ZNF514Q96K75 400 aaPredicted RBP17.85■□□□□ 0.45
CLK1-205ENST00000434813 BCL7BQ9BQE9 202 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 DOHHQ9BU89 302 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 RAD21L1Q9H4I0 556 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 TBC1D23Q9NUY8 699 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 hCG_2014768A0A024R1R8 64 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 C17orf113A0A1B0GUU1 675 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 NDUFS2O75306 463 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 GCM2O75603 506 aaPredicted RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 NTRK1P04629 796 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 C6P13671 934 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 GPR1P46091 355 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 HBA1P69905 142 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 TAP2Q03519 686 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 DPTQ07507 201 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 FCHO2Q0JRZ9 810 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 AQP6Q13520 282 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 MAD2L1BPQ15013 274 aaPredicted RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 LAIR1Q6GTX8 287 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 CRTC3Q6UUV7 619 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 ZNF547Q8IVP9 402 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 KIAA1958Q8N8K9 716 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 OR8D1Q8WZ84 308 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 DPEP2Q9H4A9 486 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 MYNNQ9NPC7 610 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 CCDC177Q9NQR7 707 aaPredicted RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 GPATCH2Q9NW75 528 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 MRPS14O60783 128 aaKnown RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 BCAS1O75363 584 aaPredicted RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 TNFRSF21O75509 655 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 CLPXO76031 633 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 FURINP09958 794 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 AQP1P29972 269 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 ERVK-21P61565 698 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 MLLT1Q03111 559 aaPredicted RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 HIST2H2ACQ16777 129 aaPredicted RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 HNRNPA1L2Q32P51 320 aaKnown RBP17.84■□□□□ 0.45
CLK1-205ENST00000434813 C9orf64Q5T6V5 341 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 HIST2H2AA3Q6FI13 130 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 NXPE4Q6UWF7 544 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 OR4K1Q8NGD4 311 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 GABARAPL3Q9BY60 117 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 CERS4Q9HA82 394 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 TRIM39Q9HCM9 518 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 CCNB1IP1Q9NPC3 277 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 SCN3BQ9NY72 215 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 PCDHGA10Q9Y5H3 936 aa17.84■□□□□ 0.45
CLK1-205ENST00000434813 EDDM13A0A1B0GTR0 161 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 PRRT4C9JH25 899 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 GABARAPO95166 117 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 PAPLNO95428 1278 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 POU2F2P09086 479 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 ACVR2AP27037 513 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 ACADLP28330 430 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 SELENOWP63302 87 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 RBBP4Q09028 425 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 MESP2Q0VG99 397 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 TMED1Q13445 227 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 CAMK2GQ13555 558 aaPredicted RBP17.83■□□□□ 0.45
CLK1-205ENST00000434813 TSTA3Q13630 321 aaPredicted RBP17.83■□□□□ 0.45
CLK1-205ENST00000434813 ELOAQ14241 798 aaKnown RBP17.83■□□□□ 0.45
CLK1-205ENST00000434813 SHHQ15465 462 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 TRMT11Q7Z4G4 463 aaKnown RBP17.83■□□□□ 0.45
CLK1-205ENST00000434813 OR52N2Q8NGI0 321 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 SMG7Q92540 1137 aaKnown RBP17.83■□□□□ 0.45
CLK1-205ENST00000434813 ZNF707Q96C28 371 aaPredicted RBP17.83■□□□□ 0.45
CLK1-205ENST00000434813 RSPRY1Q96DX4 576 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 MYOCQ99972 504 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 PALMDQ9NP74 551 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 ERVK-18Q9QC07 812 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 RAPGEFL1Q9UHV5 662 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 TSC22D4Q9Y3Q8 395 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 PCDHGB3Q9Y5G1 929 aa17.83■□□□□ 0.45
CLK1-205ENST00000434813 TCF20Q9UGU0 1960 aaKnown RBP17.83■□□□□ 0.44
CLK1-205ENST00000434813 MYO7AQ13402 2215 aa17.83■□□□□ 0.44
CLK1-205ENST00000434813 PDE4DIPQ5VU43 2346 aa17.83■□□□□ 0.44
CLK1-205ENST00000434813 PFDN1O60925 122 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 C6orf47O95873 294 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 HLA-EP13747 358 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ADRB3P13945 408 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 EPHA2P29317 976 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 CD6P30203 668 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 PIK3CBP42338 1070 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 CRATP43155 626 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 NPRL3Q12980 569 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 FADDQ13158 208 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 SPCS2Q15005 226 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 NPTX1Q15818 432 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 CTF1Q16619 201 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 PROX2Q3B8N5 592 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 FNDC3BQ53EP0 1204 aaKnown RBP17.82■□□□□ 0.44
CLK1-205ENST00000434813 GCNT6Q5T4J0 391 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 FAM71E1Q6IPT2 247 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 UNC5DQ6UXZ4 953 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ZNF852Q6ZMS4 543 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms