RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ARHGEF37A1IGU5 675 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 TRIM64A6NGJ6 449 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 TRIM64BA6NI03 449 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 A8MXE2 369 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 HAT1O14929 419 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 TBCAO75347 108 aaKnown RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 RAB40ALP0C0E4 278 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 FAM200BP0CF97 657 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 ALDH1B1P30837 517 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 MATR3P43243 847 aaKnown RBP eCLIP2.62□□□□□ -1.995e-7■■■■□ 25.1
PTPN4-205ENST00000433888 GSK3BP49841 420 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 ZNF41P51814 821 aaPredicted RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 PPIAP62937 165 aaKnown RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 SNTB1Q13884 538 aaKnown RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 KIAA0141Q14154 515 aaPredicted RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 C15orf59Q2T9L4 293 aaPredicted RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 PPP1R21Q6ZMI0 780 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 CATSPER3Q86XQ3 398 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 ARL10Q8N8L6 244 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 NAT8LQ8N9F0 302 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 SYT2Q8N9I0 419 aaPredicted RBP2.62□□□□□ -1.99
PTPN4-205ENST00000433888 KIF18AQ8NI77 898 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 CHURC1Q8WUH1 139 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 EXOC4Q96A65 974 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 VMP1Q96GC9 406 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 GBP5Q96PP8 586 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 MGME1Q9BQP7 344 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 TEX13BQ9BXU2 312 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 GDE1Q9NZC3 331 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 MORF4L1Q9UBU8 362 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 PASKQ96RG2 1323 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 A0A1W2PPM1 405 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 FAM170AA1A519 330 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 F8VVB4 439 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 F8VWA3 439 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 SLC1A7O00341 560 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 BAG3O95817 575 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 MGMTP16455 207 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 ELK3P41970 407 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 RALGDSQ12967 914 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 HSPB3Q12988 150 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 RUNX3Q13761 415 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 ZNF79Q15937 498 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 ZNF674Q2M3X9 581 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 MPP7Q5T2T1 576 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 LEMD1Q68G75 181 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 SLC24A5Q71RS6 500 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 CAMKMTQ7Z624 323 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 RCOR2Q8IZ40 523 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 SLC22A15Q8IZD6 547 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 CHCHD4Q8N4Q1 142 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 MINDY1Q8N5J2 469 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 MCUQ8NE86 351 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 BADQ92934 168 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 ZNF622Q969S3 477 aaKnown RBP eCLIP2.61□□□□□ -1.99
PTPN4-205ENST00000433888 NXNL1Q96CM4 212 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 ZNF558Q96NG5 402 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 KLHL5Q96PQ7 755 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 THUMPD3Q9BV44 507 aaKnown RBP2.61□□□□□ -1.99
PTPN4-205ENST00000433888 CNOT10Q9H9A5 744 aaKnown RBP2.61□□□□□ -1.99
PTPN4-205ENST00000433888 XAB2Q9HCS7 855 aaKnown RBP2.61□□□□□ -1.99
PTPN4-205ENST00000433888 HAO2Q9NYQ3 351 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 STK26Q9P289 416 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 MRPS18CQ9Y3D5 142 aaKnown RBP2.61□□□□□ -1.99
PTPN4-205ENST00000433888 ZFP37Q9Y6Q3 630 aaPredicted RBP2.61□□□□□ -1.99
PTPN4-205ENST00000433888 FAM205AQ6ZU69 1335 aa2.61□□□□□ -1.99
PTPN4-205ENST00000433888 TMEM129A0AVI4 362 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 A4D1N5 150 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 RPL37AP8A6NKH3 93 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 H0Y626 953 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 K7EQG2 157 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 PTGESO14684 152 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 TXNL1O43396 289 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 VENTXO95231 258 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CELF2O95319 508 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 GIG44P09565 113 aaPredicted RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 LINGO3P0C6S8 592 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 PFKFB1P16118 471 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 IFNAR1P17181 557 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CYP11B2P19099 503 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 EEF1DP29692 281 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CRKLP46109 303 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 LHX1P48742 406 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CSE1LP55060 971 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 ABCE1P61221 599 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 RBP5P82980 135 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 MZT1Q08AG7 82 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CUL3Q13618 768 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 ALCAMQ13740 583 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 OPCMLQ14982 345 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 OR4C11Q6IEV9 310 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CCDC91Q7Z6B0 441 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 IQCHQ86VS3 1027 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 NUP93Q8N1F7 819 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 PI4KAP1Q8N8J0 262 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 TC2NQ8N9U0 490 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CFAP61Q8NHU2 1237 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 KCNE4Q8WWG9 221 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 METTL21AQ8WXB1 218 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 ATL1Q8WXF7 558 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms