RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 GALNT9Q9HCQ5 603 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 ARL15Q9NXU5 204 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 NDUFAF4Q9P032 175 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 RABL2AQ9UBK7 228 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 MAN2B2Q9Y2E5 1009 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 POFUT2Q9Y2G5 429 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 HCN4Q9Y3Q4 1203 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 RAI2Q9Y5P3 530 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 LOC102723532A0A0G2JNH3 316 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 SMIM35A0A1B0GVV1 85 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 FAM227AF5H4B4 570 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PLOD3O60568 738 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 SOX14O95416 240 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 EBLN1P0CF75 366 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 POLR2CP19387 275 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ASAH1Q13510 395 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 LCN1P1Q5VSP4 162 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 MFSD14CQ5VZR4 134 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 FAM171BQ6P995 826 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF598Q86UK7 904 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 THEM5Q8N1Q8 247 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 KLHDC9Q8NEP7 349 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 DNAJB8Q8NHS0 232 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 C9orf43Q8TAL5 461 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PPIL3Q9H2H8 161 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 FKBP14Q9NWM8 211 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 GLTPQ9NZD2 209 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 NDRG2Q9UN36 371 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ADAMDEC1O15204 470 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 INSIG1O15503 277 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ENTPD6O75354 484 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PDGFAP04085 211 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ALPPP05187 535 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 HLA-EP13747 358 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ANXA8P13928 327 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF250P15622 560 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 M6PRP20645 277 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ALAS2P22557 587 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 MAP2K3P46734 347 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ERICH5Q6P6B1 374 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 TMIGD1Q6UXZ0 262 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 LINGO4Q6UY18 593 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF767PQ75MW2 155 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 NAGSQ8N159 534 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 STK40Q8N2I9 435 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 POP5Q969H6 163 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 NACC2Q96BF6 587 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 C1GALT1C1Q96EU7 318 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 TRIB3Q96RU7 358 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 DOHHQ9BU89 302 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF224Q9NZL3 707 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PDCD11Q14690 1871 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 APOL3O95236 402 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 PRPS2P11908 318 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 SRCP12931 536 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 EVI2BP34910 448 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 LIMK1P53667 647 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF284Q2VY69 593 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 XKRXQ6PP77 449 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 AQP11Q8NBQ7 271 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 ZIC5Q96T25 663 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 FAM105AQ9NUU6 356 aa11.12□□□□□ -0.63
HMGCS1-202ENST00000433297 H3BN98 237 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 PRLP01236 227 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 C1QBP02746 253 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 LAMP1P11279 417 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CCL23P55773 120 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 IL18Q14116 193 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 POU4F3Q15319 338 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.11□□□□□ -0.632e-9■■□□□ 12.3
HMGCS1-202ENST00000433297 NOXRED1Q6NXP6 359 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 TRIM69Q86WT6 500 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 FBXL6Q8N531 539 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC37A3Q8NCC5 494 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SH3BP4Q9P0V3 963 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 FBXO9Q9UK97 447 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 YARS2Q9Y2Z4 477 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 PRSS21Q9Y6M0 314 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 FNDC1Q4ZHG4 1894 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 PCDH7O60245 1069 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CSO75390 466 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SNAI1O95863 264 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SEMG1P04279 462 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 IGFBP1P08833 259 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms