RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 JRKO75564 520 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RFPL1O75677 317 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 SIX3O95343 332 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 HEXBP07686 556 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 UMODP07911 640 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ABHD2P08910 425 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CD63P08962 238 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZGLP1P0C6A0 271 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF888P0CJ79 500 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 VSIG8P0DPA2 414 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PCNAP12004 261 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 MTHFD2P13995 350 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 NR1D1P20393 614 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CXCR2P25025 360 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 GGT5P36269 586 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 HSD17B3P37058 310 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ARL1P40616 181 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLC26A3P40879 764 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CSRP3P50461 194 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 EMP2P54851 167 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 VSNL1P62760 191 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 IRF8Q02556 426 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RELAQ04206 551 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 KLC1Q07866 573 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 HYAL2Q12891 473 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 NFATC3Q12968 1075 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CDC16Q13042 620 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ATP1A4Q13733 1029 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 DOC2AQ14183 400 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLBPQ14493 270 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RBBP7Q16576 425 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PDK4Q16654 411 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 HIST2H2ACQ16777 129 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 DEFB134Q4QY38 66 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 TOR1AIP1Q5JTV8 583 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 GARNL3Q5VVW2 1013 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PRAMEF9Q5VWM5 478 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CPZQ66K79 652 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ATG9BQ674R7 924 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 HIST2H2AA3Q6FI13 130 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ADNP2Q6IQ32 1131 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PRMT9Q6P2P2 845 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 TMIGD1Q6UXZ0 262 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RPS27LQ71UM5 84 aaKnown RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PPP1R32Q7Z5V6 425 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PTRH1Q86Y79 214 aaKnown RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PDSS2Q86YH6 399 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RAB43Q86YS6 212 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 MYLK4Q86YV6 388 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 KRT78Q8N1N4 520 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RNF175Q8N4F7 328 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 TEX9Q8N6V9 391 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 AMER3Q8N944 861 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PDPRQ8NCN5 879 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ABHD11Q8NFV4 315 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR5T3Q8NGG3 340 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR2Y1Q8NGV0 311 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR51Q1Q8NH59 317 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 RHEBL1Q8TAI7 183 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ADAMTS17Q8TE56 1095 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 THAP4Q8WY91 577 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ATP6V1E2Q96A05 226 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 C8orf44Q96CB5 159 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 MTFMTQ96DP5 389 aaKnown RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PHF21BQ96EK2 531 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PEX11GQ96HA9 241 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CATSPER2Q96P56 530 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 C17orf62Q9BQA9 187 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 DHRS4Q9BTZ2 278 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 CAPS2Q9BXY5 557 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PARD6BQ9BYG5 372 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 GSX2Q9BZM3 304 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 DRC3Q9H069 523 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ING2Q9H160 280 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 PELI2Q9HAT8 420 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 GEMIN8Q9NWZ8 242 aaKnown RBP5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 P4HTMQ9NXG6 502 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 NUDT4Q9NZJ9 180 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 TMEM216Q9P0N5 145 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 HCN3Q9P1Z3 774 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 OPTCQ9UBM4 332 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZFP69BQ9UJL9 534 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF180Q9UJW8 692 aa5.47□□□□□ -1.53
HMGB3P24-201ENST00000433260 IGHV3-20A0A0C4DH32 117 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 VSTM2BA6NLU5 285 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 SYCE1LA8MT33 242 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 FAM227AF5H4B4 570 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 K7EPI3 171 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 SAP18O00422 153 aaKnown RBP5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 PRPF4O43172 522 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 CHST10O43529 356 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 B4GALT2O60909 372 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 SMIM24O75264 130 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 CDC123O75794 336 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 IPO13O94829 963 aaKnown RBP5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 KLHL18O94889 574 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 ONECUT2O95948 504 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 RECKO95980 971 aa5.46□□□□□ -1.54
HMGB3P24-201ENST00000433260 TGFB1P01137 390 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms