RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SLC34A1Q06495 639 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CETN1Q12798 172 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 PDE7AQ13946 482 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRIM29Q14134 588 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CCDC92Q53HC0 331 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ARHGAP17Q68EM7 881 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR4C11Q6IEV9 310 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM53AQ6NSI3 398 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 PSRC1Q6PGN9 363 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CNSTQ6PJW8 725 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM207Q6UWW9 146 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 GDPD4Q6W3E5 623 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 MEX3BQ6ZN04 569 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZC3H3Q8IXZ2 948 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 MRPL43Q8N983 215 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR7A2PQ8NGA2 310 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 PSMA8Q8TAA3 256 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ST7LQ8TDW4 575 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNRF4Q8WWF5 429 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM190Q8WZ59 177 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CCDC47Q96A33 483 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLCO4A1Q96BD0 722 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 GIMAP5Q96F15 307 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 BTBD9Q96Q07 612 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM237Q96Q45 408 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 PITPNM3Q9BZ71 974 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM245Q9H330 911 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 BICC1Q9H694 974 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 FNDC4Q9H6D8 234 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 KCNMB3Q9NPA1 279 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAN2C1Q9NTJ4 1040 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 PANK4Q9NVE7 773 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ANO10Q9NW15 660 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 AKAP7Q9P0M2 348 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 GMEB2Q9UKD1 530 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 KCNK6Q9Y257 313 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF510Q9Y2H8 683 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 PPP2R2CQ9Y2T4 447 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRBV2A0A0J9YWF9 115 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 SNURFLB1AK76 121 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 MLNRO43193 412 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 SAP30O75446 220 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 EML2O95834 649 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 MMP10P09238 476 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 MYOGP15173 224 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 IL10P22301 178 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 ANOS1P23352 680 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 EDNRAP25101 427 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 ATP6V1E1P36543 226 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 OR3A2P47893 321 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 CASP9P55211 416 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 RPL36AP83881 106 aaKnown RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 MYL7Q01449 175 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 IL1RL1Q01638 556 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 MFGE8Q08431 387 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 GPR50Q13585 617 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 GRB14Q14449 540 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 PPA1Q15181 289 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 TEAD2Q15562 447 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF74Q16587 644 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 ARMCX4Q5H9R4 360 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 PLPP4Q5VZY2 271 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 CD164L2Q6UWJ8 174 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 DHRS11Q6UWP2 260 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 C18orf65Q6ZTR6 163 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 DCLK2Q8N568 766 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 GBP7Q8N8V2 638 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 SIDT2Q8NBJ9 832 aaKnown RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC37A3Q8NCC5 494 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 OR5AP2Q8NGF4 316 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 GGHQ92820 318 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM46BQ96A09 425 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 MRPL38Q96DV4 380 aaKnown RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 PGLYRP2Q96PD5 576 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 LPAR4Q99677 370 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 DDX50Q9BQ39 737 aaKnown RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 IDI2Q9BXS1 227 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 NUSAP1Q9BXS6 441 aaKnown RBP2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 EXOC1Q9NV70 894 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 TBC1D13Q9NVG8 400 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 RNF186Q9NXI6 227 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMEM181Q9P2C4 612 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 FETUBQ9UGM5 382 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 KCNJ14Q9UNX9 436 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMED7Q9Y3B3 224 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 EFCAB5A4FU69 1503 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 CPS1P31327 1500 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 DISP1Q96F81 1524 aa2.77□□□□□ -1.97
HMGB1P27-201ENST00000431429 NPATQ14207 1427 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 C9orf84Q5VXU9 1444 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SCAPERQ9BY12 1400 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 NOTCH4Q99466 2003 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SRCAPQ6ZRS2 3230 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CUL7Q14999 1698 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 RIMS1Q86UR5 1692 aaKnown RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TTC37Q6PGP7 1564 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 A0A0U1RQG5 324 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC15A5A6NIM6 579 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms