RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 UTS2RQ9UKP6 389 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 TSC22D4Q9Y3Q8 395 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 PCDHB11Q9Y5F2 797 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 AP4B1Q9Y6B7 739 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 FAM220BPB1ANY3 271 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 PPM1DO15297 605 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 EPN2O95208 641 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 APBB3O95704 486 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 FURINP09958 794 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 UMPSP11172 480 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 CASP9P55211 416 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 GAB1Q13480 694 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 BLMHQ13867 455 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 GAS6Q14393 721 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SMAD2Q15796 467 aaKnown RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 NKG7Q16617 165 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 CCNYL2Q5T2Q4 361 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 DEPDC1Q5TB30 811 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 FAM71E1Q6IPT2 247 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 ZBTB49Q6ZSB9 765 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SLC22A18ASQ8N1D0 253 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 ANKFN1Q8N957 763 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 GATA6Q92908 595 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 BTBD9Q96Q07 612 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 GPR174Q9BXC1 333 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 TPSD1Q9BZJ3 242 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 VCXQ9H320 206 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 TCEAL2Q9H3H9 227 aaPredicted RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 GORASP2Q9H8Y8 452 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 LMAN1LQ9HAT1 526 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SLC6A20Q9NP91 592 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 MRPS30Q9NP92 439 aaKnown RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 PCDHGB4Q9UN71 923 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 PCDHGB5Q9Y5G0 923 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SLCO1B1Q9Y6L6 691 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 EME2A4GXA9 379 aaPredicted RBP15.94■□□□□ 0.14
USHBP1-203ENST00000431146 EVPLLA8MZ36 301 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 NTRK1P04629 796 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ZCCHC18P0CG32 403 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 GK3PQ14409 553 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 C16orf72Q14CZ0 275 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 MPEG1Q2M385 716 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ZCCHC8Q6NZY4 707 aaKnown RBP15.94■□□□□ 0.14
USHBP1-203ENST00000431146 TMEM154Q6P9G4 183 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF852Q6ZMS4 543 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 CAMKMTQ7Z624 323 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 PAPD5Q8NDF8 572 aaKnown RBP15.94■□□□□ 0.14
USHBP1-203ENST00000431146 TNIP2Q8NFZ5 429 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 OR4A15Q8NGL6 344 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 RAB11FIP5Q9BXF6 653 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 MYNNQ9NPC7 610 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 BATF3Q9NR55 127 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ATP6V1HQ9UI12 483 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 OAZ3Q9UMX2 235 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 CREG1O75629 220 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 CCT8P50990 548 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 DGKEP52429 567 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ABHD18Q0P651 414 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ABRAXAS1Q6UWZ7 409 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 GALNT10Q86SR1 603 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 NRROSQ86YC3 692 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ADGRF3Q8IZF5 1079 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 VPS37AQ8NEZ2 397 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 LCN9Q8WX39 176 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 PPCDCQ96CD2 204 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 CENPNQ96H22 339 aaPredicted RBP15.94■□□□□ 0.14
USHBP1-203ENST00000431146 DPH7Q9BTV6 452 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 TPT1P8Q9HAU6 139 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 LHX9Q9NQ69 397 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 COLEC10Q9Y6Z7 277 aa15.94■□□□□ 0.14
USHBP1-203ENST00000431146 ISM1B1AKI9 464 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 HAT1O14929 419 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 PRICKLE3O43900 615 aaPredicted RBP15.93■□□□□ 0.14
USHBP1-203ENST00000431146 C6orf47O95873 294 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 SERPINA1P01009 418 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 BSGP35613 385 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 BCL6P41182 706 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 PXNP49023 591 aaPredicted RBP15.93■□□□□ 0.14
USHBP1-203ENST00000431146 HBA1P69905 142 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 LRRC32Q14392 662 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 ANXA8L1Q5VT79 327 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 Q7L0L9 218 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 SFTPA2Q8IWL1 248 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 CBR4Q8N4T8 237 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 AMER3Q8N944 861 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 OR2L3Q8NG85 312 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 PATE1Q8WXA2 126 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 REXO5Q96IC2 774 aaKnown RBP15.93■□□□□ 0.14
USHBP1-203ENST00000431146 VPS50Q96JG6 964 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 CNBD2Q96M20 576 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 ABCG4Q9H172 646 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 KIR3DX1Q9H7L2 352 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 BTNL2Q9UIR0 455 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 HEBP2Q9Y5Z4 205 aa15.93■□□□□ 0.14
USHBP1-203ENST00000431146 C1orf226A1L170 272 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 NDUFS4O43181 175 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 PRKD3O94806 890 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 LYNP07948 512 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 NUDT7P0C024 238 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 IL9P15248 144 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms