RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IKBIPQ70UQ0 350 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 R3HCC1LQ7Z5L2 792 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 GPR141Q7Z602 305 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 SLC9B2Q86UD5 537 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ARL10Q8N8L6 244 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 OR4A15Q8NGL6 344 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ERLEC1Q96DZ1 483 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 CNDP2Q96KP4 475 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 SPATA7Q9P0W8 599 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TICRRQ7Z2Z1 1910 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 KMOO15229 486 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 B4GAT1O43505 415 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 HS6ST1O60243 411 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TBX19O60806 448 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 SEMA3DO95025 777 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ADH1BP00325 375 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 FUCA1P04066 466 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 FABP3P05413 133 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 FPR1P21462 350 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 C5AR1P21730 350 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 PTX3P26022 381 aaPredicted RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TPP2P29144 1249 aaPredicted RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TTKP33981 857 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 RYKP34925 604 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 HSD17B2P37059 387 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 DAPP51397 102 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 GABARAPL2P60520 117 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 REEP5Q00765 189 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 CD47Q08722 323 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TSTA3Q13630 321 aaPredicted RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 RAB39AQ14964 217 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 IRF4Q15306 451 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 SHHQ15465 462 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 COX20Q5RI15 118 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 C6orf141Q5SZD1 244 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 KCTD8Q6ZWB6 473 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ERI1Q8IV48 349 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 NAGSQ8N159 534 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 KRT78Q8N1N4 520 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 OR4K1Q8NGD4 311 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 OR52N2Q8NGI0 321 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ELSPBP1Q96BH3 223 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TUBA1CQ9BQE3 449 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 EPS8L2Q9H6S3 715 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ATAD3AQ9NVI7 634 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ICKQ9UPZ9 632 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 NAALAD2Q9Y3Q0 740 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 LOC100130705A0A1B0GUX0 176 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
HOXC4-202ENST00000430889 E2F6O75461 281 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 C6orf47O95873 294 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 GBAP04062 536 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 APODP05090 189 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 KLK1P06870 262 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 HTR1AP08908 422 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 DCKP27707 260 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 DNAJA1P31689 397 aaKnown RBP13.36□□□□□ -0.27
HOXC4-202ENST00000430889 KIR2DL1P43626 348 aaPredicted RBP13.36□□□□□ -0.27
HOXC4-202ENST00000430889 TAS2R50P59544 299 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 PHEXP78562 749 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 C2orf80Q0P641 193 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 IER5LQ5T953 404 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 XAF1Q6GPH4 301 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 ANKRD54Q6NXT1 300 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.36□□□□□ -0.27
HOXC4-202ENST00000430889 TMEM26Q6ZUK4 368 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 CCDC80Q76M96 950 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 CHST15Q7LFX5 561 aaPredicted RBP13.36□□□□□ -0.27
HOXC4-202ENST00000430889 ANKRD53Q8N9V6 530 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 C11orf65Q8NCR3 313 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF555Q8NEP9 628 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 SNX19Q92543 992 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF566Q969W8 418 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 CIDECQ96AQ7 238 aaPredicted RBP13.36□□□□□ -0.27
HOXC4-202ENST00000430889 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 MS4A8Q9BY19 250 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 TMEM38AQ9H6F2 299 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 POLR1BQ9H9Y6 1135 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 U3KQV3 271 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 COL4A2P08572 1712 aa13.36□□□□□ -0.27
HOXC4-202ENST00000430889 hCG_2039718K7EN88 272 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 PLPP1O14494 284 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 LINC01565O15544 149 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 RPN2P04844 631 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 IL7RP16871 459 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 RAD23AP54725 363 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 ESRRGP62508 458 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms