RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IGHA2P01877 340 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 TECRLQ5HYJ1 363 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 GCNT6Q5T4J0 391 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 METTL21CQ5VZV1 264 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 TSSK4Q6SA08 328 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 ULK2Q8IYT8 1036 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 SETD6Q8TBK2 473 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 KCNS3Q9BQ31 491 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 PADI2Q9Y2J8 665 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 NRP2O60462 931 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 IDH3AP50213 366 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-207ENST00000429896 MC1RQ01726 317 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 BNIP1Q12981 228 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 RIPK1Q13546 671 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 SLC29A4Q7RTT9 530 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 GHDCQ8N2G8 530 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 DHRSXQ8N5I4 330 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 ACTR10Q9NZ32 417 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 CXorf51AA0A1B0GTR3 108 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 PLOD3O60568 738 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 RFPL1O75677 317 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-207ENST00000429896 CD200R1Q8TD46 325 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 UTS2RQ9UKP6 389 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 PDE10AQ9Y233 779 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 TPST2O60704 377 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 MED26O95402 600 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 KHKP50053 298 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 CASP9P55211 416 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 SPESP1Q6UW49 350 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 LNX2Q8N448 690 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 CAPSLQ8WWF8 208 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 C17orf62Q9BQA9 187 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 TPRKBQ9Y3C4 175 aa12.45□□□□□ -0.42
PTCH1-207ENST00000429896 ZNFX1Q9P2E3 1918 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 PLRG1O43660 514 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 ALDOAP04075 364 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 PRPS1L1P21108 318 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 KCTD11Q693B1 232 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 NAIF1Q69YI7 327 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 FRMD7Q6ZUT3 714 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 ADGRG6Q86SQ4 1221 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 PEG10Q86TG7 708 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 GAL3ST1Q99999 423 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 LRMDAQ9H2I8 198 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 ABCB10Q9NRK6 738 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 SUCOQ9UBS9 1254 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 MYRFQ9Y2G1 1151 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 RCVRNP35243 200 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 CCT3P49368 545 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 COL9A2Q14055 689 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 HERC3Q15034 1050 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 GFOD2Q3B7J2 385 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 PAOXQ6QHF9 649 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 FBXL8Q96CD0 374 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 SLC35G5Q96KT7 338 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 HOPXQ9BPY8 73 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 NUAK2Q9H093 628 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 POT1Q9NUX5 634 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 SARDHQ9UL12 918 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 CFL2Q9Y281 166 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 GPC6Q9Y625 555 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 A0A1W2PRB8 838 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 ITGA2P17301 1181 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 OMPP47874 163 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 KLF10Q13118 480 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 AMIGO2Q86SJ2 522 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 OR52E1Q8NGJ3 308 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 PELI2Q9HAT8 420 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 CLEC1BQ9P126 229 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 HCN2Q9UL51 889 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 NFS1Q9Y697 457 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 OAS3Q9Y6K5 1087 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 A0A0G2JMZ2 1700 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 A0A0J9YY10 115 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 MROH6A6NGR9 719 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 GRM7Q14831 915 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 KIR2DS3Q14952 304 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 DUS1LQ6P1R4 473 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 MFSD2AQ8NA29 543 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF540Q8NDQ6 660 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF382Q96SR6 550 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 NPAS2Q99743 824 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 FNDC11Q9BVV2 318 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM168Q9H0V1 697 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 CALML5Q9NZT1 146 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 CAPN14A8MX76 684 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 AREL1O15033 823 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 CCNA2P20248 432 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 SLC18A1P54219 525 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 BNIP2Q12982 314 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 LARS2Q15031 903 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 PTPRRQ15256 657 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms