RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 PANX1Q96RD7 426 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 COQ7Q99807 217 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 DPH2Q9BQC3 489 aaPredicted RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 SPATA9Q9BWV2 254 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ATP13A2Q9NQ11 1180 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 FAM120CQ9NX05 1096 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 KIF17Q9P2E2 1029 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CRLS1Q9UJA2 301 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 PADI2Q9Y2J8 665 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 PCDHB11Q9Y5F2 797 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 HTTP42858 3142 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 CENPFP49454 3210 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 KIAA1671Q9BY89 1806 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 PNMA8CA0A1B0GUJ8 204 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 C1orf226A1L170 272 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 SHOXO15266 292 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 GCM2O75603 506 aaPredicted RBP8.5□□□□□ -1.05
CDH13-202ENST00000428848 MED26O95402 600 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 VIPP01282 170 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 CCR7P32248 378 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 OR1D2P34982 312 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 HNF1BP35680 557 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 SPAM1P38567 509 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 NSG1P42857 185 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 CSNK1DP48730 415 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 AP2S1P53680 142 aaPredicted RBP8.5□□□□□ -1.05
CDH13-202ENST00000428848 PTPN5P54829 565 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 B4GALNT1Q00973 533 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 BNC1Q01954 994 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 ZNF33BQ06732 778 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 TARDBPQ13148 414 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDH13-202ENST00000428848 PLD1Q13393 1074 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 TIGD6Q17RP2 521 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 TOR1AIP1Q5JTV8 583 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 TPRG1LQ5T0D9 272 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 FRG2Q64ET8 278 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 SYCE2Q6PIF2 218 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 C19orf48Q6RUI8 117 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 Q6ZPB1 254 aaPredicted RBP8.5□□□□□ -1.05
CDH13-202ENST00000428848 ZSWIM9Q86XI8 627 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 P3H2Q8IVL5 708 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 PARP16Q8N5Y8 322 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 CELF2-AS1Q8N7Q2 184 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 TTC16Q8NEE8 873 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 FAM83FQ8NEG4 500 aaPredicted RBP8.5□□□□□ -1.05
CDH13-202ENST00000428848 LILRB1Q8NHL6 650 aaPredicted RBP8.5□□□□□ -1.05
CDH13-202ENST00000428848 MYDGFQ969H8 173 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 IGSF21Q96ID5 467 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 FRG2BQ96QU4 278 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 LYSMD1Q96S90 227 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 TMEM184CQ9NVA4 438 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 FBXL12Q9NXK8 326 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 ARL15Q9NXU5 204 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 MOSPD1Q9UJG1 213 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 MKLN1Q9UL63 735 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 SPEF1Q9Y4P9 236 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 PCDHGB3Q9Y5G1 929 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 PDE4DIPQ5VU43 2346 aa8.5□□□□□ -1.05
CDH13-202ENST00000428848 IGLV3-16A0A075B6K0 115 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TEX51A0A1B0GUA7 166 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 K7ERQ8 282 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CAPN5O15484 640 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 PQBP1O60828 265 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 RPLP0P05388 317 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 JUPP14923 745 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CTRB1P17538 263 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 HNMTP50135 292 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 PTCHD3Q3KNS1 767 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 FBXO43Q4G163 708 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SPOUT1Q5T280 376 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 CTRB2Q6GPI1 263 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 PRSS55Q6UWB4 352 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 ZNF621Q6ZSS3 439 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TPGS1Q6ZTW0 290 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 TAS1R1Q7RTX1 841 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ANKRD33Q7Z3H0 272 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 METTL3Q86U44 580 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 RASGRP3Q8IV61 690 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CLECL1Q8IZS7 167 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 AMER2Q8N7J2 671 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 DCAF4L2Q8NA75 395 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 OR4C15Q8NGM1 316 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SETD6Q8TBK2 473 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CHTF18Q8WVB6 975 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ASB11Q8WXH4 323 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TMEM169Q96HH4 297 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TOX2Q96NM4 488 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 COL21A1Q96P44 957 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CCDC32Q9BV29 185 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TPT1P8Q9HAU6 139 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 RPRD1BQ9NQG5 326 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 ACOXLQ9NUZ1 547 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ZDHHC3Q9NYG2 299 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ZNF226Q9NYT6 803 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SPASTQ9UBP0 616 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms